Bioconductor Organism.dplyr issues

Bioconductor / Organism.dplyr

https://bioconductor.org/packages/Organism.dplyr

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src_organism not working

#20 mari-lynne closed 6 months ago
1
Bioconductor BBS: Organism.dplyr / BioC 3.18, 10/27/93

#19 mtmorgan closed 1 year ago
1
atlantic salmon annotation

#18 marwa38 closed 11 months ago
3
Error regarding new dbplyr (v1.3.0.9000) changes

#17 dvantwisk closed 5 years ago
3
support GRangesFilter() without being in a list

#16 mtmorgan opened 7 years ago
0
GRangesFilter needs a show method

#15 mtmorgan closed 7 years ago
0
table id_go_all has unappealing field names

#14 vjcitn opened 7 years ago
1
remove redundant sqlite file

#13 mtmorgan closed 7 years ago
0
`filter=` arguments should accept a single filter, as well as list of filters

#12 mtmorgan closed 7 years ago
1
`fiveUTRsBYTranscript(, filter=)` does not return values for all transcripts

#11 mtmorgan closed 7 years ago
2
`transcripts()` does not populate metadata

#10 mtmorgan opened 7 years ago
0
`exonsBy()` and others don't return same columns as GRanges version

#9 mtmorgan closed 7 years ago
2
do schema tables have consistent names?

#8 mtmorgan opened 7 years ago
0
build and check within Bioc timelimits

#7 mtmorgan closed 7 years ago
1
Avoid Camel_snake filter names

#6 mtmorgan closed 7 years ago
1
Use AnnotationFilters to avoid naming conflicts

#5 mtmorgan opened 7 years ago
0
persistent cache for result of src_organism()?

#4 vjcitn opened 7 years ago
1
Filters

#3 mtmorgan opened 7 years ago
6
Appropriate table structure

#2 mtmorgan opened 7 years ago
4
add unit tests for src_organism class construction

#1 vobencha closed 7 years ago
0