BiomedSciAI fuse-med-ml issues

BiomedSciAI / fuse-med-ml

A python framework accelerating ML based discovery in the medical field by encouraging code reuse. Batteries included :)

Apache License 2.0

134 stars 34 forks source link

issues

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adding r2 metric

#371 mosheraboh opened 9 hours ago
0
multi test dataloaders

#370 mosheraboh closed 4 days ago
0
avoid from gpu sync attempt when using single gpu

#369 mosheraboh closed 1 week ago
0
Integrate `ModularTokenizerOp` with Hugging Face remote 🤗

#368 SagiPolaczek closed 1 week ago
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support custom configure_optimizers method and avoid from saving random model by default

#367 mosheraboh closed 1 week ago
0
move modular tokenizer to fuse

#366 mosheraboh closed 2 weeks ago
0
to backward support packages importing metrics from a previous sub module

#365 YoelShoshan closed 2 weeks ago
1
added new metrics for regression tasks

#364 IdoAmosIBM closed 2 weeks ago
2
clearml offline mode

#363 mosheraboh closed 3 weeks ago
0
Support tuples as sample IDs in Bootstrapping

#362 ellabarkan opened 1 month ago
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Oai example

#361 liamhazan closed 1 month ago
0
new OpRandCrop for augmentation

#360 bensha6757 closed 1 month ago
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fixed bug of specificity calculation

#359 ellabarkan closed 1 month ago
0
Matching keys lengths and new metrics

#358 IdoAmosIBM closed 2 months ago
0
Upper bound `numpy<2.0`

#357 SagiPolaczek closed 3 months ago
1
implement hdf5 dataset reader op

#356 mosheraboh closed 3 months ago
0
use scipy implementation for Pearson correlation

#355 alex-golts closed 3 months ago
0
min_size_per_dim + changes for scalars inputs+outputs support

#354 YoelShoshan closed 2 months ago
0
add workaround to support fsdp

#353 mosheraboh closed 4 months ago
1
MetricCountSeqAndTokens counst tokens in label (if exist) + improving epoch metrics print

#352 michalozeryflato closed 4 months ago
0
Remove usage of `xmlrunner` package

#351 SagiPolaczek opened 4 months ago
0
Bump GitHub workflows' python version to `3.9`

#350 SagiPolaczek closed 5 months ago
0
collate now supports minimal dimension + added more support in samples cacher + added interface validation utility

#349 YoelShoshan closed 4 months ago
0
Crop pad fix

#348 IdoAmosIBM closed 6 months ago
0
shared memory utility helping to speedup reading from files significantly if enough RAM is available

#347 YoelShoshan closed 6 months ago
0
adds count num sequences and tokens metric

#346 mosheraboh closed 6 months ago
2
Perplexity gpu mem optimization

#345 mosheraboh closed 6 months ago
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support pl module test step

#344 sivanravidos closed 6 months ago
0
Crop padding in collate

#343 liamhazan closed 7 months ago
0
Make `NDict` (hopefully) lighter to import

#342 SagiPolaczek closed 8 months ago
0
Support TSV files in `file_io`

#341 SagiPolaczek closed 8 months ago
0
Add OpReplaceAnyElements to ops_common

#340 sivanravidos closed 8 months ago
0
Added readthedocs config for documentation

#339 rakesh9177 closed 8 months ago
8
pearson correlation metric

#338 alex-golts closed 9 months ago
0
Make `op_id` a really optional argument in `OpCast`

#337 SagiPolaczek closed 10 months ago
0
address tuple in collate

#336 michalozeryflato closed 10 months ago
1
OpSetRandomChoice

#335 mosheraboh closed 1 year ago
0
Bfloat16 support

#334 mosheraboh closed 1 year ago
0
Added `__len__` to `PipelineDefault`

#333 SagiPolaczek closed 1 year ago
0
add a method to add sample ids to a dataset

#332 michalozeryflato closed 1 year ago
0
adding torch_utils with select method similar to numpy

#331 michalozeryflato closed 1 year ago
0
clearml logger + improved mnist starter

#330 shatz01 closed 1 year ago
0
add ignore_index to auc_roc metric

#329 michalozeryflato closed 1 year ago
0
Support a better string representation for `NDict`

#328 SagiPolaczek closed 1 year ago
2
Shaked fuse

#327 shakedpe closed 1 year ago
0
OpFunc: input=None passes the entire sample_dict

#326 michalozeryflato closed 1 year ago
0
add weight to extract loss class

#325 mosheraboh closed 1 year ago
0
add an option in CollateDefault to add fixed items to batch_dict

#324 mosheraboh closed 1 year ago
0
Remove `pyproject.toml`

#323 SagiPolaczek closed 1 year ago
0
I got “NameError: name 'NDict' is not defined” from ndict.py, how can I fix it

#322 Betty-J closed 1 year ago
4