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Bishop-Laboratory / autoPLIER-analysis

Analysis for the autoPLIER project
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EDA_Julian/Ewing-TF-IDF.ipynb #12

Closed Julian-Borbeck closed 3 years ago

Julian-Borbeck commented 3 years ago

Added markdown to the file Ewing-TF-IDF.pynb

millerh1 commented 3 years ago

Good job! I don't have any changes to suggest on this analysis -- I think we'll need to think about the limitations of IDF, such as the punishing of over-represented cell types and the issue of labels which are too high in the hierarchy still being present