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BlueBrain
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Atlas-Download-Tools
Search, download, and prepare brain atlas data.
https://atlas-download-tools.rtfd.io
GNU Lesser General Public License v3.0
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Test
#111
EmilieDel
closed
1 year ago
1
Don't require opencv-python if opencv is already installed
#110
heerener
closed
1 year ago
0
Fix CI (Remove 3.6 python, fix numpy ValueError, change syntax for tox>4)
#109
EmilieDel
closed
1 year ago
0
Handle `PIL.UnidentifiedImageError`
#108
EmilieDel
closed
1 year ago
0
Handle `PIL.UnidentifiedImageError`
#107
EmilieDel
closed
1 year ago
0
Make `get_experiment_list_from_gene` case insensitive
#106
jankrepl
opened
2 years ago
0
Add `download` scripts
#105
EmilieDel
closed
2 years ago
0
Manually updating copyright year
#104
alex4200
closed
2 years ago
0
Fix linting
#103
EmilieDel
closed
2 years ago
0
Fix CI
#102
EmilieDel
closed
2 years ago
0
Updating copyright year 2022
#101
bbpgithubaudit
closed
2 years ago
3
Change banner to add source (Allen Institute)
#100
FrancescoCasalegno
closed
2 years ago
1
Don't error out in rma_all for incomplete response
#99
Stannislav
opened
2 years ago
0
Some RMA queries never return all results
#98
Stannislav
opened
2 years ago
0
Add the "download image" command
#97
Stannislav
closed
3 years ago
0
Restructure the CLI
#96
Stannislav
closed
3 years ago
0
Add the "downloads faithful dataset" CLI command
#95
Stannislav
opened
3 years ago
0
Uncaught network problem exceptions in CLI dataset download
#94
Stannislav
opened
3 years ago
0
atldld dataset download show numeric plane of section instead of text
#93
Stannislav
opened
3 years ago
0
Restrict to click>=8
#92
Stannislav
closed
3 years ago
0
CLI crashes for `click<8`
#91
Stannislav
closed
3 years ago
2
Remove pandas and responses from requirements
#90
Stannislav
closed
3 years ago
0
Remove unnecessary requirements
#89
Stannislav
closed
3 years ago
0
Dedicated `CLI` section in the docs
#88
jankrepl
opened
3 years ago
0
Download of annotated atlases (part of the Allen API)
#87
jankrepl
opened
3 years ago
0
Investigate 3D expression grid (part of the Allen API)
#86
jankrepl
opened
3 years ago
0
Implement `atldld search img` command
#85
EmilieDel
closed
3 years ago
0
Add the `atldld search` command
#84
Stannislav
closed
3 years ago
0
Refactor the cli module
#83
Stannislav
closed
3 years ago
0
Mark test using the internet
#82
jankrepl
closed
3 years ago
0
Update `docs` with new API
#81
jankrepl
opened
3 years ago
1
Add more example of CLI command in README
#80
EmilieDel
closed
3 years ago
0
Dataset download entrypoint
#79
jankrepl
closed
3 years ago
3
Fix generator docstring
#78
jankrepl
closed
3 years ago
0
Fix Description
#77
EmilieDel
closed
3 years ago
0
Add description in setup.py
#76
EmilieDel
closed
3 years ago
0
Cache responses of xy_to_pir_API_single
#75
Stannislav
closed
3 years ago
3
Implement `xy_to_pir` locally
#74
jankrepl
closed
3 years ago
0
Customizable cache folder
#73
Stannislav
closed
3 years ago
0
Cleanup README header
#72
Stannislav
closed
3 years ago
0
`xy_to_pir` computed locally
#71
jankrepl
closed
3 years ago
0
Download faithful dataset
#70
Stannislav
opened
3 years ago
0
get_corners_in_ref_space: use affine transformations instead of queries
#69
Stannislav
opened
3 years ago
2
Control the logging level in the CLI
#68
Stannislav
opened
3 years ago
0
Move the CLI subcommands to submodules
#67
Stannislav
closed
3 years ago
0
Add the "atldld dataset preview" command
#66
Stannislav
closed
3 years ago
2
Clean up pytest markers
#65
jankrepl
opened
3 years ago
7
Avoid recomputatation of `transformation` inside of `DisplacementField.warp`
#64
jankrepl
opened
3 years ago
0
Ignore build artifacts
#63
Stannislav
closed
3 years ago
0
Change order of matrix multiplications + other optimizations (`get_parallel_transform`)
#62
jankrepl
closed
3 years ago
0
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