BlueBrain Atlas-Download-Tools issues

BlueBrain / Atlas-Download-Tools

Search, download, and prepare brain atlas data.

https://atlas-download-tools.rtfd.io

GNU Lesser General Public License v3.0

17 stars 7 forks source link

issues

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Test

#111 EmilieDel closed 1 year ago
1
Don't require opencv-python if opencv is already installed

#110 heerener closed 1 year ago
0
Fix CI (Remove 3.6 python, fix numpy ValueError, change syntax for tox>4)

#109 EmilieDel closed 1 year ago
0
Handle `PIL.UnidentifiedImageError`

#108 EmilieDel closed 1 year ago
0
Handle `PIL.UnidentifiedImageError`

#107 EmilieDel closed 1 year ago
0
Make `get_experiment_list_from_gene` case insensitive

#106 jankrepl opened 2 years ago
0
Add `download` scripts

#105 EmilieDel closed 2 years ago
0
Manually updating copyright year

#104 alex4200 closed 2 years ago
0
Fix linting

#103 EmilieDel closed 2 years ago
0
Fix CI

#102 EmilieDel closed 2 years ago
0
Change banner to add source (Allen Institute)

#100 FrancescoCasalegno closed 2 years ago
1
Don't error out in rma_all for incomplete response

#99 Stannislav opened 2 years ago
0
Some RMA queries never return all results

#98 Stannislav opened 2 years ago
0
Add the "download image" command

#97 Stannislav closed 3 years ago
0
Restructure the CLI

#96 Stannislav closed 3 years ago
0
Add the "downloads faithful dataset" CLI command

#95 Stannislav opened 3 years ago
0
Uncaught network problem exceptions in CLI dataset download

#94 Stannislav opened 3 years ago
0
atldld dataset download show numeric plane of section instead of text

#93 Stannislav opened 3 years ago
0
Restrict to click>=8

#92 Stannislav closed 3 years ago
0
CLI crashes for `click<8`

#91 Stannislav closed 3 years ago
2
Remove pandas and responses from requirements

#90 Stannislav closed 3 years ago
0
Remove unnecessary requirements

#89 Stannislav closed 3 years ago
0
Dedicated `CLI` section in the docs

#88 jankrepl opened 3 years ago
0
Download of annotated atlases (part of the Allen API)

#87 jankrepl opened 3 years ago
0
Investigate 3D expression grid (part of the Allen API)

#86 jankrepl opened 3 years ago
0
Implement `atldld search img` command

#85 EmilieDel closed 3 years ago
0
Add the `atldld search` command

#84 Stannislav closed 3 years ago
0
Refactor the cli module

#83 Stannislav closed 3 years ago
0
Mark test using the internet

#82 jankrepl closed 3 years ago
0
Update `docs` with new API

#81 jankrepl opened 3 years ago
1
Add more example of CLI command in README

#80 EmilieDel closed 3 years ago
0
Dataset download entrypoint

#79 jankrepl closed 3 years ago
3
Fix generator docstring

#78 jankrepl closed 3 years ago
0
Fix Description

#77 EmilieDel closed 3 years ago
0
Add description in setup.py

#76 EmilieDel closed 3 years ago
0
Cache responses of xy_to_pir_API_single

#75 Stannislav closed 3 years ago
3
Implement `xy_to_pir` locally

#74 jankrepl closed 3 years ago
0
Customizable cache folder

#73 Stannislav closed 3 years ago
0
Cleanup README header

#72 Stannislav closed 3 years ago
0
`xy_to_pir` computed locally

#71 jankrepl closed 3 years ago
0
Download faithful dataset

#70 Stannislav opened 3 years ago
0
get_corners_in_ref_space: use affine transformations instead of queries

#69 Stannislav opened 3 years ago
2
Control the logging level in the CLI

#68 Stannislav opened 3 years ago
0
Move the CLI subcommands to submodules

#67 Stannislav closed 3 years ago
0
Add the "atldld dataset preview" command

#66 Stannislav closed 3 years ago
2
Clean up pytest markers

#65 jankrepl opened 3 years ago
7
Avoid recomputatation of `transformation` inside of `DisplacementField.warp`

#64 jankrepl opened 3 years ago
0
Ignore build artifacts

#63 Stannislav closed 3 years ago
0
Change order of matrix multiplications + other optimizations (`get_parallel_transform`)

#62 jankrepl closed 3 years ago
0