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BlueBrain
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MorphIO
A python and C++ library for reading and writing neuronal morphologies
https://morphio.readthedocs.io
Apache License 2.0
26
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Don't ignore choice of `MORPHIO_ENABLE_COVERAGE`.
#452
1uc
closed
1 year ago
1
Prevent `pytest` from picking up pybind11 tests.
#451
1uc
closed
1 year ago
1
Allow options in `Collection.load`.
#450
1uc
closed
1 year ago
1
Bump HighFive to v2.7.1
#449
mgeplf
closed
1 year ago
0
Prefer exception over assert.
#448
1uc
closed
1 year ago
1
Implement native support for unified containers
#447
1uc
opened
1 year ago
0
Cannot install morphio using pip on macos with M1 and Python3.10
#446
marwan-abdellah
closed
1 year ago
22
Update clang-format CI to 22.04.
#445
1uc
closed
1 year ago
0
Abstraction for morphology collection.
#444
1uc
closed
1 year ago
7
Add support for a storage container for many morphologies in one file
#443
matz-e
closed
1 year ago
4
Set locale to ensure dots are recognized as decimal points in SWC files
#442
adrien-berchet
opened
1 year ago
5
try new windows py311 h5py release
#441
mgeplf
closed
1 year ago
1
Make neurolucida state machine thread-safe
#440
NadirRoGue
closed
1 year ago
1
Improve doc
#439
adrien-berchet
closed
1 year ago
8
Release prep for v3.3.4
#438
mgeplf
closed
1 year ago
0
Update github actions:
#437
mgeplf
closed
1 year ago
0
Replace assert by exception
#436
Helveg
closed
1 year ago
1
Assert used where an exception should be raised
#435
Helveg
closed
1 year ago
0
Render README as RST
#434
Helveg
closed
1 year ago
0
PyPI readme rendered as MD instead of RST
#433
Helveg
closed
1 year ago
0
Should we support less restrictive SWC format?
#432
adrien-berchet
opened
1 year ago
12
Add more options for ASC and SWC loaders
#431
adrien-berchet
opened
1 year ago
14
Fix failing tests for macos-latest that uses python3.11
#430
eleftherioszisis
closed
1 year ago
0
New release?
#429
matz-e
closed
1 year ago
9
travis: so long, and thanks for the fish
#428
matz-e
closed
1 year ago
0
Add a flag to disable some checks
#427
adrien-berchet
opened
1 year ago
6
Drop `-Werror` from compiler flags
#426
1uc
closed
1 year ago
3
Bump pybind to v2.10.0 release
#425
mgeplf
closed
1 year ago
0
update links to morphology documentation
#424
mgeplf
closed
1 year ago
1
Dead link to Glia H5 specificiation
#423
DexterAntonio
closed
1 year ago
2
Cleanup tests
#421
mgeplf
closed
2 years ago
0
The SWC format string used in `sscanf` is unnecessarily clamping the …
#420
mgeplf
closed
2 years ago
6
issue with swc morphology
#419
arnaudon
closed
2 years ago
8
enable test that was mistakenly disabled
#418
mgeplf
closed
2 years ago
0
Missing `iter_type` kwarg in `morphio.Morphology.iter`
#417
eleftherioszisis
opened
2 years ago
0
Mutable morphology copy constructor reindexes sections
#416
eleftherioszisis
opened
2 years ago
0
Cleanup soma
#415
eleftherioszisis
closed
2 years ago
0
Cleanup: Move single lines from readonly section source to header
#414
eleftherioszisis
closed
2 years ago
1
cleanup mutable morphology
#413
mgeplf
closed
2 years ago
1
Fix section order after deleting sections
#412
eleftherioszisis
closed
2 years ago
0
Better write for soma types
#411
mgeplf
closed
9 months ago
2
Non-recursive deletion of a child changes the children order
#410
eleftherioszisis
closed
2 years ago
0
Better 'diameter' field in ASC writer
#409
mgeplf
closed
1 year ago
3
Add `operator->` for iterators, for better ergonomics
#408
mgeplf
closed
2 years ago
0
Allow SWC and ASC morphologies to be built from std:string
#407
mgeplf
closed
2 years ago
2
Update HighFive to version 2.4.1.
#406
1uc
closed
2 years ago
0
cleanup ASC reader
#405
mgeplf
closed
2 years ago
0
Update python ci installation command
#404
NadirRoGue
closed
2 years ago
1
Improve ascii morphology reading performance
#403
NadirRoGue
closed
2 years ago
12
Color-formatted messages thrown as exceptions
#402
NadirRoGue
opened
2 years ago
4
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