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BoPeng
/
simuPOP
A general-purpose forward-time population genetics simulation environment.
http://bopeng.github.io/simuPOP/
GNU General Public License v2.0
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ModuleNotFoundError when importing simupop: "No module named '_simuPOP_std'"
#122
lfmcmillan
closed
1 week ago
17
Fixed links to cookbook and figures in user guide and reference manual that have moved
#121
lfmcmillan
closed
1 week ago
2
Cookbook links from simuPOP homepage, User Guide and Reference Manual are broken
#120
lfmcmillan
closed
1 week ago
5
Fix compatibility with Python 3.11
#119
BoPeng
closed
5 months ago
0
add github actions for testing
#118
SimonGreenhill
closed
5 months ago
1
Py3.9 deprecates the second argument to random.shuffle
#117
SimonGreenhill
closed
5 months ago
6
Issue installing simuPOP's new patch due to zlib.h missing file
#116
marina-klemm
closed
7 months ago
4
Issue114
#115
BoPeng
closed
7 months ago
0
Weight = -1 for CloneGenoTransmitter tries to create more offspring than it can handle
#114
marina-klemm
closed
7 months ago
17
Cannot use frequency list to initialize beginFreq in trajectory
#113
marina-klemm
closed
8 months ago
3
Selection with clonal reproduction not working
#112
cruzan-lab
closed
8 months ago
40
MlSelector with Loci=sim.ALL_AVAIL not working
#111
cruzan-lab
closed
8 months ago
2
How to export my simulation after saveCSV got deprecated?
#110
marina-klemm
closed
10 months ago
2
Subpopulation statistics
#109
cruzan-lab
closed
10 months ago
18
RuntimeError: Cannot set __builtins__ for a dictionary.
#108
marina-klemm
closed
11 months ago
4
Syntax error in defdict.py example script
#107
cruzan-lab
closed
11 months ago
2
Extracting statistics from individual subpopulations
#106
cruzan-lab
closed
11 months ago
17
compile error: simuPOP_shstd not found
#105
ntakebay
closed
1 year ago
4
Changing subpopulation migration parameters
#104
cruzan-lab
closed
11 months ago
5
conda-forge release of simuPOP 1.1.12 fails
#103
BoPeng
closed
5 days ago
2
simuPOP 1.1.11 doesn't compile with Python 3.11
#102
skumagai
closed
1 year ago
2
Generational Fst estimates remain low despite low Ne and minimal migration
#101
ojholland
opened
1 year ago
1
Print banner to stderr
#100
noamBarkai
closed
1 year ago
0
print banner information to stderr
#99
noamBarkai
closed
1 year ago
0
banner information should be written to stderr not stdout
#98
noamBarkai
closed
1 year ago
0
CVE-2007-4559 Patch
#97
TrellixVulnTeam
closed
1 year ago
0
>>>output file not available after run is complete.
#96
cruzan-lab
closed
1 year ago
2
conda-forge recipe does not work
#95
BoPeng
closed
11 months ago
0
ValueError with EventsBased model
#94
evanwcarson
closed
2 years ago
4
Why these is no mapSelect?
#93
BoPeng
closed
2 years ago
1
InstantChangeModel
#92
BoPeng
closed
2 years ago
5
Simulation of meta-insects population
#91
MatBiocentis
closed
11 months ago
2
Clonal evolution
#90
cruzan-lab
closed
2 years ago
10
Pair crosses in simuPOP
#89
khornick1
closed
2 years ago
7
ImportPopulation() and linkage between loci
#88
ChrystelleDelord
closed
3 years ago
4
SimuPOP and multithreading
#87
ChrystelleDelord
closed
1 year ago
3
demographic Ne with age structure?
#86
nclowell
closed
3 years ago
2
got multiple values for argument 'numOffspring'
#85
nclowell
closed
3 years ago
8
Problem with LD Computation
#84
EricFriedlander
closed
4 years ago
7
Seed inconsistency between Linux and Windows
#83
rougerbaptiste
closed
2 years ago
1
Save population with VSPs and continue to evolve
#82
khornick1
closed
4 years ago
4
Non-operator form of stat function for Fst
#81
nclowell
closed
4 years ago
3
Complex assortative mating model
#80
MrLocuace
closed
5 years ago
4
Maternal inheritance of trait problem
#79
emmcarr
closed
3 years ago
4
ImportError: No module named '_simuPOP_std'
#78
sasuke79
closed
5 years ago
8
Issue with RevertIf
#77
EricFriedlander
closed
5 years ago
2
Genotype frequencies for multiple loci
#76
JKHopf
closed
5 years ago
2
Value Error: matting.cpp: 1728
#75
natashaserrao
closed
5 years ago
4
Determining subpopulation names
#74
natashaserrao
closed
5 years ago
6
Graphing number of alleles in simuPOP
#73
natashaserrao
closed
5 years ago
3
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