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BridgesLab
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PredictorsDietInducedObesity
This repository contains code and manuscripts for a project in the lab relating to predicting the amount of diet induced obesity.
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Fix Deseq script to output p-value for main diet effect with interaction term
#42
qtran1
opened
8 years ago
0
Create DESeq output from a full model
#41
qtran1
opened
8 years ago
0
Combine all 4 cohorts
#40
qtran1
opened
8 years ago
0
Compare Kallisto Mapping to HTseq Mapping
#39
davebridges
opened
9 years ago
1
Improve Mapping Efficiency
#38
davebridges
opened
9 years ago
6
Create Barplot Generating Script for Juvenile HFD RNAseq
#37
davebridges
closed
9 years ago
2
What Correlates with the Variations in Fasting Induced Weight Loss
#36
davebridges
opened
9 years ago
0
Generate a Better Model for Longitudinal Weight Gain
#35
davebridges
opened
9 years ago
2
Look at Krakoff Studies on Energy Expenditure
#34
davebridges
opened
9 years ago
1
Discuss Long Term HFD Paper
#33
davebridges
closed
10 years ago
0
State Why Fasting Response Was Tested In Introduction
#32
davebridges
closed
10 years ago
0
Remove all mention of increased variability
#31
davebridges
closed
10 years ago
0
Check All Effects Separated by Cohort
#30
davebridges
closed
10 years ago
5
Update Asterisks for Statistics of Post-Diet Hormone Levels
#29
davebridges
closed
10 years ago
0
Create Script to Make Table 2
#28
davebridges
closed
10 years ago
0
Update Food Intake Figures
#27
davebridges
closed
10 years ago
0
Consider Joan's Comment in the Discussion
#26
davebridges
closed
10 years ago
1
Address Preprint Issue
#25
davebridges
closed
10 years ago
2
Explain Supplementary Figure 2
#24
davebridges
closed
10 years ago
0
Explain Lack of NCD in Figure 4
#23
davebridges
closed
10 years ago
1
Clarify Utility of FIgure 2
#22
davebridges
closed
10 years ago
1
Fix reference to Figure 3B
#21
davebridges
closed
10 years ago
0
Clarify Language Used Describing Reductions in Food Intake
#20
davebridges
closed
10 years ago
0
Consistency between NCD and Chow
#19
davebridges
closed
10 years ago
0
Clarify Fasting Response and Diet Effects on Weight Gain
#18
davebridges
closed
10 years ago
1
Clarify details in Figure 3
#17
davebridges
closed
10 years ago
1
Examine Absolute Weight Loss Rather than Percent Weight Loss
#16
davebridges
closed
10 years ago
1
Address Cross-Cohort Variability
#15
davebridges
closed
10 years ago
2
Clarify Chosen Fasting Time and Refed Time
#14
davebridges
closed
10 years ago
0
Alter discussion to include caveat regarding energy expenditure
#13
davebridges
closed
10 years ago
0
Clarify the food composition
#12
davebridges
closed
10 years ago
1
Assess Normality for Hormone and Body Weight Trends
#11
davebridges
closed
10 years ago
1
Check Variance as a Function of Time
#10
davebridges
opened
10 years ago
0
Discuss Zhang et al paper
#9
davebridges
closed
10 years ago
0
Fix Cohort Numbers
#8
davebridges
closed
10 years ago
0
Incorporate JH and ARS Comments
#7
davebridges
closed
10 years ago
0
README file for data
#6
davebridges
opened
10 years ago
0
Denote where each figure comes from
#5
davebridges
opened
10 years ago
0
Add Code for Post-Diet Hormone Data
#4
davebridges
closed
10 years ago
0
Add Code for High Fat Diet Weight Gain Data
#3
davebridges
opened
10 years ago
0
Include Code for ob/ob Glucose Data
#2
davebridges
opened
10 years ago
0
Add Code and Figures for Prospective Hormone Assay
#1
davebridges
closed
10 years ago
0