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TkNA
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Louvain within data type partitioning and CSV network input
#34
newmanno
closed
1 year ago
1
CSV input and BiBC list
#33
newmanno
closed
1 year ago
1
Ignore division by 0 warnings in computing fisher, as it still correctly produces a combined p-value of 0
#32
macovskym
closed
1 year ago
1
Fix calculation of fold change percent agreement for aggregate data
#31
macovskym
closed
1 year ago
1
Implement paired t-test
#30
macovskym
closed
1 year ago
1
FloatingPointError, run_on_subsamples.py, nested-subsampling
#29
bruceamm
closed
11 months ago
1
Refactor subsample creation and implement nested subsampling
#28
macovskym
closed
10 months ago
1
Make cell coordinates match the cells' actual names
#27
macovskym
closed
1 year ago
0
Account for r being within epsilon of 1 for single-cell data
#26
macovskym
closed
1 year ago
0
Single-cell: Intake experiment data regardless of axis title
#25
macovskym
closed
1 year ago
1
Ensure that cells in single-cell data have unique coordinates
#24
macovskym
closed
1 year ago
1
Ensure that the correct axis is used for checking for distinct ranks when using Spearman correlations
#23
macovskym
closed
1 year ago
0
Add 0 percentile column to subsample result analysis
#22
macovskym
closed
1 year ago
1
Fix subsampling and add columns to subsample analysis output with unique names for both variables and the edge
#21
macovskym
closed
1 year ago
4
Add metatreatment capabilities to single-cell reconstruction and fix single-cell CSV conversion
#20
macovskym
closed
1 year ago
0
Ignore unnecessary warning when doing peason correlation with constant input
#19
macovskym
closed
1 year ago
0
Enable computation of fold change when the mean/median is 0 for a treatment
#18
macovskym
closed
1 year ago
0
Add argument to parallelized scripts to control number of cores used
#17
macovskym
closed
1 year ago
1
Convert README to markdown
#16
macovskym
closed
1 year ago
0
In error message, differentiate between node groups not being in map and not being in giant component
#15
macovskym
closed
1 year ago
0
Correct argument style in random networks error messages
#14
macovskym
closed
1 year ago
0
Update .gitignore to ignore output from running example commands
#13
macovskym
closed
1 year ago
0
Random networks: Use temp dirs as data intermediaries
#12
macovskym
closed
1 year ago
0
Raise default percent agreement threshold to 75%
#11
macovskym
closed
1 year ago
0
"EOFError: Ran out of input" during Compute Network Stats
#10
Sankalpsp21
closed
1 year ago
2
Add workarounds for numpy and scipy bugs in independent t-test
#9
macovskym
closed
1 year ago
0
Intake experiment data regardless of axis title
#8
macovskym
closed
1 year ago
0
Non puc filters col fixed calc
#7
newmanno
closed
1 year ago
0
Add option to use independent t-test to compare data
#6
macovskym
closed
1 year ago
0
Csv conversion optimization
#5
newmanno
closed
1 year ago
0
Change correlation consistency column to use the configured filter and display it in the column title
#4
newmanno
closed
1 year ago
0
calc_network_props.py needs a mapping file even if BiBC is not calculated
#3
newmanno
closed
1 year ago
1
assess_network.py needs to handle both floats and ints
#2
newmanno
closed
1 year ago
1
nx.connected_components_subgraphs does not work on calc_network_properties.py
#1
newmanno
closed
1 year ago
1
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