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CCBR / Pipeliner

An open-source and scalable solution to NGS analysis powered by the NIH's Biowulf cluster.
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fix macs2 peak calling #379

Closed tovahmarkowitz closed 5 years ago

tovahmarkowitz commented 5 years ago

Improve MACS2 peak calling to: a) use the ppqt cross-correlation values for read extension for SE data b) use PE data from bam files when applicable