CCBR / Pipeliner

An open-source and scalable solution to NGS analysis powered by the NIH's Biowulf cluster.
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chip-seq mirna-seq quality-control rna-seq single-cell-rna-seq whole-exome-sequencing whole-genome-sequencing

Welcome to Pipeliner - an open-source and scalable solution to NGS analysis powered by the NIH's Biowulf cluster.

Pipeliner provides access to a set of best-practices NGS pipelines developed, tested, and benchmarked by experts at CCBR and NCBR.

Questions or need help?

Please check out our FAQ or contact page for different ways of getting in touch with the team.

Pipeliner is CHANGING!!!

Please visit CCBR github page for new features and release schedule.