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Corals for 116 _stranded_ RNA-seq libraries
Sending RNA
20M reads
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# Update May 28th
Today, I was able to complete the pipeline up till deseq2 or possibly featurecounts. The Star script is finished, and now, within the Star rule, I am using samtools to separate th…
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Thank you very much for your help, thank you
I want to know if this tool can handle RNA-seq data, or can it only handle single-cell data?
I wish you good luck with your research
l1y1y updated
1 month ago
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I'm wondering if there is concise documentation somewhere for reproducing the exact analysis of the TCGA/GTEX data in this [paper](https://www.nature.com/articles/nbt.3772) (but with new samples).
h…
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- https://github.com/broadinstitute/gtex-pipeline/tree/master/rnaseq
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Hello!
We are interested in generating mouse transcriptomics data. I was wondering if there are any recommendations for the minimum number of reads to perform so that the data will be ideal to run t…
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您好,我在使用 dnbc4tools rna run 的时候,出现报错,信息如下:
代码:
export LD_LIBRARY_PATH=/HXsz1/YQ/Software/Miniconda3/envs/dnbc4tools-2.1.2/lib:/HXsz1/YQ/Software/Miniconda3/lib:/usr/lib64:/usr/lib
binscr=/HXsz1/YQ…
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Dear authors,
Could cheui be used to identify modifications in datasets derived from the new ONT kit SQK-RNA004, or it is only compatible with 002?
Thanks in advance!
Pan