MGI-tech-bioinformatics DNBelab_C_Series_HT_scRNA-analysis-software issues

MGI-tech-bioinformatics / DNBelab_C_Series_HT_scRNA-analysis-software

An open source and flexible pipeline to analysis high-throughput DNBelab C Series single-cell RNA datasets

MIT License

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Dnbc4 dev

#86 lishuangshuang0616 closed 3 days ago
0
How to add a marker gene for building a custom reference for dnbc4tools?

#85 jiangjasson closed 1 day ago
4
ImportError:undefined symbol: BrotliSharedDictionaryDestroyInstance

#84 jiangjasson closed 3 days ago
3
dnbc4tools rna run 的时候报错：Signals.SIGABRT: 6

#83 YaoQiong1127 opened 6 days ago
18
scATAC version 2.1.2 SIGNALS error description

#82 lishuangshuang0616 opened 1 week ago
7
请问注释的原理是什么

#81 ultraypy opened 1 week ago
1
subprocess.CalledProcessError

#80 hullv opened 2 weeks ago
5
subprocess.CalledProcessError:

#79 hullv closed 2 weeks ago
0
how would you convert the output of dnbc2tools to count matrix

#78 sherry1000001 closed 2 weeks ago
8
Command failed with exit code 255

#77 Arknights2 closed 3 weeks ago
9
Exception: The chemistry and darkreaction are unable to be automatically determined.

#76 Xxhongs closed 3 weeks ago
2
使用PE100模式测序是否适用DNBc4tools

#75 Tc940417 closed 1 month ago
2
dnbc4tools rna run: Unable to find custom marker genes in the 02.count/features.tsv.gz file even they are appeared in the 01.data/final_sorted.bam

#74 zebrafishCC closed 1 month ago
11
Saturation problem

#73 hullv closed 1 month ago
9
ERROR when running dnbc4tools rna

#72 kobeho24 opened 1 month ago
13
RNA velocity分析

#71 tyyl622 closed 1 month ago
6
version 2.1.2

#70 lishuangshuang0616 closed 2 months ago
0
Error in barcodeRanks(t(m), lower = 0.005) : insufficient unique points for computing knee/inflection points 2024-04-24

#69 hullv closed 1 month ago
9
可以使用Soupx对dnbc4tools产生的raw_matrix和filter_matrix进行去环境RNA污染吗？

#68 kjHuoo closed 1 month ago
2
How does DNBC4tools calculate RNA velocity, and how can I use the results from RNAvelocity_matrix directory.

#67 yemao701 closed 1 month ago
1
BGISEQ-500/DNBSEQ-T7 platform demultiplexing

#66 Maple-sakura closed 2 months ago
3
Error code: SAW-A10400, get signal: 18

#65 Tc940417 closed 2 months ago
11
dnbc4tools atac run 运行报错

#64 Ruvic-chen closed 1 month ago
7
Error in .local(m, ...) : insufficient unique points for computing knee/inflection points

#63 Gh-Genetics opened 3 months ago
4
BAM file generated by DNBelab

#62 TianYu-828 closed 3 months ago
0
DNBC4Tools产生的单细胞数据可以使用MARVEL进行RNA剪接分析吗？

#61 TianYu-828 opened 4 months ago
4
如何通过调整拐点调整细胞数目

#60 momo0519 opened 4 months ago
3
matrix.mtx.gz文件表头汇总信息中raw与filter matrix基因数和非零数值与行数不一致的问题

#59 antecede closed 4 months ago
7
dnbc4tools run 报错

#58 owo12138 opened 5 months ago
37
how to make this pipeline suitable for TE repeats quantification in genome

#57 HUNNNGRY opened 5 months ago
1
运行run the main flow 报错

#56 owo12138 closed 5 months ago
2
dnbc4rna run报错- data - ERROR Command failed with exit code -6

#55 ZiggeyQi opened 5 months ago
18
dnbc4rna run报错- data - ERROR Command failed with exit code -6

#54 ZiggeyQi closed 5 months ago
0
conda安装dnbc4tools环境报错

#53 ZiggeyQi closed 5 months ago
2
scATAC-seq bam file

#52 yc508 closed 2 months ago
4
RUN error: count - ERROR Command failed with exit code 134

#51 zengh58 closed 2 months ago
12
关于参考基因组添加marker基因的问题

#50 hejian41 closed 2 months ago
6
Unable to complete cDNA mapping!

#49 shaidulberg closed 2 months ago
5
华大单细胞分析工具输入数据问题

#48 Zjianglin closed 6 months ago
6
bioconda::bioconductor-genomeinfodbdata-1.2.9-r42hdfd78af_0 problems

#47 Quianter closed 2 months ago
4
final.bam convert to fastq file

#46 Gordonlu66 closed 2 months ago
2
自己使用DNBC4tools的结果与公司返回的结果比较

#45 Bathroomboss closed 2 months ago
8
再次请教技术老师，runRNA步骤大概需要使用多少内存呢？

#44 tyyl622 closed 6 months ago
14
KeyError: 'index'

#43 yc508 opened 6 months ago
1
技术老师您好，请问当每个样品有两对儿fq测序数据时，要怎么输入到dnbc4tools呢？

#42 tyyl622 closed 6 months ago
2
Error: package or namespace load failed for ‘Seurat’:

#41 yc508 closed 6 months ago
8
Error in loadNamespace(x) : there is no package called ‘argparse’

#40 uddamvathanak closed 2 months ago
3
DNBC4tools run 步骤出现问题

#39 momo0519 opened 7 months ago
3
Can't recognize relative file paths [BUG]

#38 lishuangshuang0616 closed 2 months ago
0
报告中显示的细胞数量和doublets_info.txt中的细胞数相差很多

#37 antecede closed 8 months ago
7