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CCBR / Pipeliner

An open-source and scalable solution to NGS analysis powered by the NIH's Biowulf cluster.
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Fix sequenza error #439

Closed mtandon09 closed 4 years ago

mtandon09 commented 4 years ago

This fixes a sequenza error when there are too few breaks to plot on a chromosome.

Also adds parallelization automatically if $SLURM_CPUS_PER_TASK is an environment variable.

And better argument handling.