scrnaQC_Reports.R: New Rmd for all SingleR annotations

CCBR / Pipeliner

An open-source and scalable solution to NGS analysis powered by the NIH's Biowulf cluster.

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scrnaQC_Reports.R: New Rmd for all SingleR annotations #453

Open wong-nw opened 4 years ago

wong-nw commented 4 years ago

All UMAPs and SingleR violins for cell type annotation are available in QC image directories. Requires table output image of cell type counts (scrnaQC.R) and Rmarkdown for html output.