Open wong-nw opened 4 years ago
Write R (or Rmd) script to perform following DE: Cluster vs Rest Contrast comparisons from contrasts.tab
Use 3 DE algorithms: MAST edgeR::QLFit+QLFTest limma::trend
Return all three outputs for comparisons. Include Venn diagrams of overlapping DEGs
Write R (or Rmd) script to perform following DE: Cluster vs Rest Contrast comparisons from contrasts.tab
Use 3 DE algorithms: MAST edgeR::QLFit+QLFTest limma::trend
Return all three outputs for comparisons. Include Venn diagrams of overlapping DEGs