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CCBR / Pipeliner

An open-source and scalable solution to NGS analysis powered by the NIH's Biowulf cluster.
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RNASeq DE naming error due to "." in sample #476

Open slsevilla opened 1 year ago

slsevilla commented 1 year ago

Sample ID's are erroring when names include ".R[A-Z]" during DE, but not during QC. I assume this is due to the fact that the script is somehow filtering after ".R" to remove the R1/R2 from the fastq file name.

If this can't be fixed, then should at least be a note in the documentation.

skchronicles commented 1 year ago

@slsevilla Can you attach a log file with the error?

Best, @skchronicles