CCBR / spacesavers2

https://ccbr.github.io/spacesavers2
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:rocket: spacesavers2 :rocket:

Table of Contents:

Background

Welcome! spacesavers2:

New improved parallel implementation of spacesavers. spacesavers is soon to be decommissioned!

Note: spacesavers2 requires python version 3.11 or later and the xxhash library. These dependencies are already installed on biowulf (as a conda env).

spacesavers2 has the following Basic commands:

spacesavers2 typical workflow looks like this:

Check out the detailed documentation for more details. Please reach out to Vishal Koparde with queries/comments.


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