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CCMS-UCSD / GNPSDocumentation

Documentation for GNPS and related tools as written in mkdocs
https://ccms-ucsd.github.io/GNPSDocumentation/
MIT License
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Quickstart Tutorial Module #50

Open mwang87 opened 5 years ago

mabelgon88 commented 5 years ago

I can work on this as a first trial

mabelgon88 commented 5 years ago

I think that in order to introduce the capacities of GNPS for totally new users as me, who are not actually inside Dorrestein´s lab we could introduce a description of the kind of tasks that could be performed on this platform as is separated in the website. Something like this draft ideas.

  1. Task type 1: Data analysis: It responds to the need to recognize previously characterized and studied compounds regardless of whether they have been previously annotated or not.
  2. Type of task 2: GNPS Spectrum Library Knowledgebase: It responds to the need of annotate molecules previously and not prevously reported.
  3. Type of task 3: GNPS-MassIVE Datasets: It responds to the need of where to store data.
  4. Type of task 4: Advanced Analysis Tools: It responds to the need to find biological and medical interpretation of data or improve applications of molecular networking.

What do you think?

mwang87 commented 5 years ago

That is correct, this specific quickstart tutorial will be for classic molecular networking.

It will be using it from here:

https://gnps-quickstart.ucsd.edu/

We can also in the future support

numbers 2, 3, 4 as separate modules.