Global Natural Products Social Molecular Networking (GNPS, http://gnps.ucsd.edu/) is a web-based mass spectrometry ecosystem that aims to be an open-access knowledge base for community-wide organization and sharing of raw, processed or identified tandem mass (MS/MS) spectrometry data. GNPS aids in identification and discovery throughout the entire life cycle of data; from initial data acquisition/analysis to post publication.
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GNPS Workflows are available on the following repository: https://github.com/CCMS-UCSD/GNPS_Workflows
conda create -n mkdocs
pip install -r requirements.txt
mkdocs serve
mkdocs gh-deploy
Wang, M. et al. Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking. Nat. Biotechnol. 34, 828–837 (2016). https://www.nature.com/articles/nbt.3597