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CCRGeneticsBranch / Oncogenomics_v2

Oncogenomics portal version 2
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Batch cluster OEL8 migration issues #44

Closed hsienchao closed 8 months ago

hsienchao commented 8 months ago

Hi Anney / Hsien-chao,

This is ongoing problem lately with Oncogenomics and AVIA annotations, could you please check (see below).

Hsien-Chao could you please again check the RNA expression tables and ranking plots.

Thank you, Manoj

hsienchao commented 8 months ago

Hi Manoj,

All the variants have been successfully processed after addressing various issues:

  1. A mount was missing on the newly migrated server.
  2. The Oracle Perl module was not installed on the server.
  3. Several paths were changed.

I have resolved these problems, and the view has been refreshed. Please let me know if you observe any other issues.

Thanks,

Anney