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CRC-FONDA
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A2-metagenome-snakemake
Collection of metagenomic read mapping workflows that have been tailored for different computational architectures.
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Add submodules to allegro
#21
eaasna
closed
2 years ago
0
Add submodules to redwood
#20
eaasna
closed
2 years ago
0
Allegro
#19
eaasna
closed
2 years ago
0
Submodules
#18
eaasna
closed
2 years ago
0
Job granulatrity workflows
#17
eaasna
opened
2 years ago
0
Create MG-4 to split reads into a chosen number of bins
#16
eaasna
closed
2 years ago
0
MG-4
#15
eaasna
closed
2 years ago
0
[FEATURE] create MG3
#14
eaasna
closed
2 years ago
0
MG-3
#13
eaasna
closed
2 years ago
0
Switches for MG-R
#12
eaasna
opened
2 years ago
0
Produce abundance table
#11
eaasna
closed
2 years ago
1
Consolidate read mapping results
#10
eaasna
closed
2 years ago
2
[FIX] fix search distributor
#9
eaasna
closed
2 years ago
0
conda environments should be shared by all worfklows
#8
eaasna
closed
2 years ago
0
Forcing threads instead of processes
#7
eaasna
closed
2 years ago
1
Data simulation should be separate from workflow
#6
eaasna
closed
2 years ago
0
Alternative broken
#5
eaasna
closed
2 years ago
0
TODO
#4
eaasna
closed
3 years ago
0
Comparing results from different workflows
#3
eaasna
closed
2 years ago
1
Bovine data is protein sequence (MG-R)
#2
eaasna
opened
3 years ago
2
Results on bovine gut dataset
#1
eaasna
closed
3 years ago
2