NEMO <https://www.nemo-ocean.eu/>_ (Nucleus for European Modelling of the Ocean) is a state-of-the-art modelling framework for
research activities and forecasting services in ocean and climate sciences.
FABM <https://github.com/fabm-model/fabm>_ (Framework for Aquatic Biogeochemical Models) is a programming framework for biogeochemical
models of marine and freshwater systems.
This repository adds the coupling within the NEMO-TOP module to run biogeochemical models through
FABM for NEMO4.0. The starting NEMO branch is version 4.0.4, revision 14301 <http://forge.ipsl.jussieu.fr/nemo/browser/NEMO/releases/r4.0/r4.0.4?rev=14301>.
Details of the changes made, along with an example compilation can be seen on the repository wiki <https://github.com/pmlmodelling/NEMO4.0-FABM/wiki>.
NEMO relies on XIOS <https://forge.ipsl.jussieu.fr/ioserver> to provide input/output. A brief overview of
the format of XIOS xml files is available here <https://github.com/pmlmodelling/NEMO4.0-FABM/wiki/Using-XIOS>.
This repository includes arch files needed for compiling on UEA HPC (Ada). Instructions for how to compile on UEA HPC can be found here <https://github.com/CefasRepRes/NEMO4.0-FABM/wiki/Installation-with-intel-compilers>_
NB. While this repository contains modifications for using FABM, FABM itself must be compiled separately.