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CenterForMedicalGeneticsGhent
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WisecondorX
WisecondorX — An evolved WISECONDOR
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About NIPT analysis
#128
LL54669466
opened
6 days ago
0
Normalizing autosomes part of predict command not working
#127
Stikus
opened
1 month ago
1
Fix version number 1.2.9
#126
Stikus
opened
1 month ago
0
seed usage update
#125
koen-swaerts
closed
2 months ago
0
seed not correctly used
#124
koen-swaerts
closed
2 months ago
3
fix numpy error
#123
koen-swaerts
closed
2 months ago
3
TypeError: ufunc 'isnan' not supported for the input types... ?
#122
mhmtgenc
closed
2 months ago
6
log2ratio of X/Y chromosomes
#121
asaki1986
closed
3 months ago
0
Clarification on Reference Samples for WisecondorX
#120
ilya90906767
opened
4 months ago
0
Error in set.seed(seed)
#119
mital14
opened
6 months ago
0
What does the gray background mean in the picture
#118
zhangleizone
opened
6 months ago
1
Fix manifest includes
#117
matthdsm
closed
6 months ago
0
fix manifest
#116
matthdsm
closed
6 months ago
0
newref error
#115
ilya90906767
opened
6 months ago
3
Code restructure and bugfixing
#114
matthdsm
closed
6 months ago
0
Segments do not take into account chromosome sizes
#113
lbeltrame
opened
7 months ago
0
What are the possible values for --yfrac argument? NIPT reference.
#112
jiveshs98
opened
8 months ago
0
Why the results of multiple analyses of the same sample using WisecondorX are inconsistent.
#111
ct-ting
opened
9 months ago
0
constitutional guides for X/Y chromosomes
#110
drtconway
opened
10 months ago
0
WisecondorX:bowtie2 settings
#109
annanever82
opened
12 months ago
0
Can WisecondorX software be used to evaluate the copy number of genes ？
#108
zhoudreames
closed
1 year ago
2
Add VCF support
#107
nvnieuwk
opened
1 year ago
4
homozygous deletion missed
#106
JMdeSteAgathe
opened
1 year ago
0
Add VCF support to the `predict` command
#105
nvnieuwk
opened
1 year ago
2
Non-human genomes with more than 21+XY chromosomes
#104
AlainRico
closed
1 year ago
3
convert: parallelise by contig
#103
matthdsm
opened
1 year ago
0
Chore/restructure
#102
matthdsm
closed
1 year ago
0
add seed arg for DNAcopy
#101
matthdsm
closed
1 year ago
0
lint code with black
#100
matthdsm
closed
1 year ago
0
wisecondorX ValueError: The requested array has an inhomogeneous shape after 1 dimensions
#99
xuanblo
closed
6 months ago
4
BED files are 1-based instead of 0-based, half-closed
#98
leonorpalmeira
opened
1 year ago
2
RFE: parallelized CBS (ParDNAcopy)
#97
lbeltrame
opened
2 years ago
1
RFE: Set random seed for CBS
#96
lbeltrame
closed
1 year ago
5
Set yfrac manual
#95
Sondr11
closed
10 months ago
0
Plot for chromosome
#94
Sondr11
closed
10 months ago
0
Allow adding the plot name to the genome plots
#93
lbeltrame
closed
2 years ago
0
Add sample name in plots as title (optionally)
#92
lbeltrame
closed
2 years ago
4
Over-segmentation issue
#91
cpreviti
opened
2 years ago
0
Alt handling
#90
matthdsm
closed
1 year ago
1
Gender detection
#89
liza-alpinia
opened
2 years ago
10
Fetal fraction
#88
RaraykinValery
closed
2 years ago
1
cutoffs for gain and loss
#87
asaki1986
closed
2 years ago
2
μw meaning in calculation of segmental z-score.
#86
chesterlee7246
closed
2 years ago
4
Compute VAF
#85
lmanchon
closed
3 years ago
2
Restructure project and upgrade cli
#84
matthdsm
closed
2 years ago
0
WisecondorX reference file
#83
smruti241
opened
3 years ago
0
fonts needed for plots?
#82
claus-hultschig
closed
3 years ago
1
Sex determination
#81
smruti241
closed
3 years ago
1
Wisecondor gender predicts all samples as females
#80
smruti241
closed
3 years ago
7
TypeError: bad operand type for abs(): 'str'
#79
KhanhLPBao
opened
3 years ago
2
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