Open jeffchen2000 opened 5 years ago
run below command, I got pdf file without any error message, however, the read coverage curve not shown.
Integrate-vis.py exon-exp -b TCGA_PRAD_333_bedpe/TCGA-ZG-A8QZ-01.bedpe -s TCGA-ZG-A8QZ-01 -m simulated.TCGA-ZG-A8QZ-01.bam -r ../../INTEGRATE-Vis.1.0.0/data/reference_genome/GRCh38_r85.all.fa -g ../../INTEGRATE-Vis.1.0.0/data/gene_model/Homo_sapiens.GRCh38.85.gtf -o ./ panelC -k
run below command, I got pdf file without any error message, however, the read coverage curve not shown.
Integrate-vis.py exon-exp -b TCGA_PRAD_333_bedpe/TCGA-ZG-A8QZ-01.bedpe -s TCGA-ZG-A8QZ-01 -m simulated.TCGA-ZG-A8QZ-01.bam -r ../../INTEGRATE-Vis.1.0.0/data/reference_genome/GRCh38_r85.all.fa -g ../../INTEGRATE-Vis.1.0.0/data/gene_model/Homo_sapiens.GRCh38.85.gtf -o ./ panelC -k