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ClandininLab
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brainsss2
refactor of the brainsss repo for 2-photon imaging analysis
MIT License
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consider queueing to multiple partitions where possible
#36
rueberger
opened
1 year ago
1
removed if not none clause
#35
bellabrez
closed
2 years ago
0
motion correction for func always set to 1 core because of some None logic
#34
bellabrez
opened
2 years ago
0
ANTs installation error
#33
bellabrez
closed
2 years ago
7
PCA_moco missing 'datafile' arg?
#32
bellabrez
closed
2 years ago
1
common input API for workflow element functions
#31
poldrack
opened
2 years ago
1
workflow settings should be cleaner
#30
poldrack
opened
2 years ago
4
packaging bits and bobs
#29
rueberger
opened
2 years ago
1
create separate function to register an image into atlas space
#28
poldrack
opened
2 years ago
1
fix atlas_registration inverse transform from atlas to func
#27
poldrack
closed
2 years ago
8
Rp dev explosion
#26
poldrack
closed
2 years ago
0
Rp dev sta
#25
poldrack
closed
2 years ago
0
Rp 7 motpars
#24
poldrack
closed
2 years ago
0
replace ants SyN with dipy implementation
#23
poldrack
closed
2 years ago
1
masking before clustering for supervoxels
#22
poldrack
closed
2 years ago
2
Rp 7 motpars
#21
poldrack
closed
2 years ago
0
need to refactor motion correction workflow
#20
poldrack
closed
2 years ago
1
motion parameters are not being properly saved
#19
poldrack
closed
2 years ago
1
Rp 9 regression
#18
poldrack
closed
2 years ago
0
Rp 8 reporting
#17
poldrack
closed
2 years ago
0
Rp 13 mocostepsize
#16
poldrack
closed
2 years ago
0
directory variable name confusing
#15
poldrack
opened
2 years ago
0
fixed and tested
#14
poldrack
closed
2 years ago
0
catch size mismatch for moco
#13
poldrack
closed
2 years ago
0
add zoom-in for anatomical alignment visualization
#12
poldrack
opened
2 years ago
0
Perform behavioral prediction analysis and add to report
#11
poldrack
closed
2 years ago
1
generate functional mean in atlas space
#10
poldrack
closed
2 years ago
1
add delta r2 for behav model vs confound
#9
poldrack
closed
2 years ago
0
add numerical values into desmtx correlation plot
#8
poldrack
closed
2 years ago
0
use stronger motion confounds
#7
poldrack
closed
2 years ago
2
compute t stat for FD in regression.py
#6
poldrack
closed
2 years ago
1
add in exploded view for visualizations in report
#5
poldrack
opened
2 years ago
0
add STB results into report
#4
poldrack
closed
2 years ago
0
add mean back into residuals from confound regression
#3
poldrack
closed
2 years ago
0
smoothing should be 2d rather than 3d
#2
poldrack
opened
2 years ago
0
Create LICENSE
#1
poldrack
closed
2 years ago
0