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Clinical-Genomics-Lund / bonsai

Visualize and analyze resistance and outbreak of bacterial pathogen
https://bonsai-wgs.readthedocs.io/en/latest/
GNU General Public License v3.0
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TB: two genes to look at specifically #153

Open LordRust opened 8 months ago

LordRust commented 8 months ago

The katG (isoniazid) and pncA (pyrazinamid) should be checked for stop and frame shift mutations in any position. If present score as resistant.