Clinical-Genomics-Lund / bonsai

Visualize and analyze resistance and outbreak of bacterial pathogen
https://bonsai-wgs.readthedocs.io/en/latest/
GNU General Public License v3.0
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Bonsai

[!WARNING] Bonsai is under development in an alpha stage. Expect uneven documentation, breaking changes, and bugs until the official 1.0 release.

Analyze outbreak, antimicrobial resistance and virulence factors in bacteria.

Intended to visualize results from JASEN pipeline.

Installation

See the documentation for instructions on how to install and configure Bonsai.