Release v0.4.0 - Githubissues

Clinical-Genomics-Lund / bonsai

Visualize and analyze resistance and outbreak of bacterial pathogen

https://bonsai-wgs.readthedocs.io/en/latest/

GNU General Public License v3.0

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Release v0.4.0 #163

Closed mhkc closed 7 months ago

mhkc commented 7 months ago

[v0.4.0]

Added

Added Sample name, LIMS ID, and Sequencing run as selectable columns
Sample name in sample view table links to sample
New upload script (upload_sample.py) that takes a upload config in YAML format as input

Changed

Sample id is assigend by concating lims_id and sequencing_run
Sample id is not displayed by default
API route POST /samples/ returns sample_id
Removed upload_sample.sh