Clinical-Genomics-Lund / bonsai

Visualize and analyze resistance and outbreak of bacterial pathogen
https://bonsai-wgs.readthedocs.io/en/latest/
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Hide sourmash files when QC is rejected #198

Open svartapaerlan opened 3 months ago

svartapaerlan commented 3 months ago

Please describe your role and what you want to do The sourmash lookup currently will include all samples in the upload directory.

Describe the solution you'd like The respective sourmash needs to move them to another directory if they do not pass the QC.

Additional context Sourmash files must removed (not moved) when samples are removed.