Clinical-Genomics-Lund / nextflow_wgs

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Provide containers through params #100

Open Jakob37 opened 11 months ago

Jakob37 commented 11 months ago

In the current GitHub README, the following instructions are written:

Required by 3 VEP annotation steps, edit main.nf. use ctrl + f ensembl-vep_release_103.sif and replace with your container

It would be much preferable to provide container paths through params instead, and remove any need to update the main.nf script itself.