Open Jakob37 opened 11 months ago
genomic_shards_file = "$baseDir/shards_5_38.csv"
genomic_shards_num = 5
CLINVAR
vcf_anno
expansionhunter_catalog_gav
expansionhunter_catalog
sentieon_model
split_ref
genomic_shards_file = "$baseDir/shards_5_38.csv"genomic_shards_num = 5CLINVAR(this is provided through the VCFAnno file (vcf_anno)expansionhunter_catalog_gav(Seems theexpansionhunter_catalogis in use, but not this one)sentieon_modelI guess this is the ML model, but seems like it isn't actually in usesplit_refNot actually in use?