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Clinical-Genomics-Lund / nextflow_wgs

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Can mutect2 be dropped in favor of sentieon only? #138

Closed alkc closed 9 months ago

alkc commented 9 months ago

sentieon DNAscope outputs mito annotations identical to what we already get from Mutect2

alkc commented 9 months ago

Nope. It misses variants from the 2021 mito validation.