Closed alkc closed 5 months ago
What is changed? What is the result of the changes?
This update adds new VEP consequences to all deployed rank models:
[[splice_donor_5th_base_variant]] score = 5 priority = 4 string = 'splice_donor_5th_base_variant' [[splice_donor_region_variant]] score = 5 priority = 4 string = 'splice_donor_region_variant' [[splice_polypyrimidine_tract_variant]] score = 5 priority = 4 string = 'splice_polypyrimidine_tract_variant' [[start_retained_variant]] score = 1 priority = 2 string = 'start_retained_variant' [[sequence_variant]] score = 1 priority = 0 string = 'sequence_variant'
Also fixes the filename version for the onco production model.
Update w/ VEP 105-111 annotations:
This change will be tested in the verification branch PR #142
Description
What is changed? What is the result of the changes?
This update adds new VEP consequences to all deployed rank models:
Also fixes the filename version for the onco production model.
TODO
Update w/ VEP 105-111 annotations:
Generate new rank models:
Diff against vep103 versions:
Deploy
Type of change
Testing
This change will be tested in the verification branch PR #142