Enable Chanjo2

[Jakob37]

Description and reviewer info

Re-enable d4 file generation for Chanjo2, as it seems it will get some action after all.

Type of change

• [ ] Documentation
• [x] Patch
• [ ] Minor change
• [ ] Major change

Checklist

• [x] Self-review of my code
• [x] Update the CHANGELOG
• [x] Tag the latest commit (vX.Y.Z format)
• [x] Log samples used for testing in the Verification_samples_log Excel sheet

Documentation

• [ ] At least one other person has reviewed my changes (not required for trivial changes)

Patch

• [x] Stub run completes without errors or new warnings
• [ ] At least one other person has reviewed and approved my code (not required for trivial changes)

Major / Minor change

• [ ] Stub run completes without errors or new warnings
• [ ] onco run finishes without any new warnings/errors and the results can be loaded into scout
• [ ] wgs single run finishes without any new warnings/errors and the results can be loaded into scout
• [ ] wgs trio run finishes without any new warnings/errors and the results can be loaded into scout
• [ ] At least one other person has reviewed and approved my code
• [ ] I have made corresponding changes to the documentation (software versions, etc.)

Test/review documentation

Review performed by

• [ ] Alexander
• [x] Jakob
• [ ] Paul
• [ ] Ryan
• [ ] Viktor

(Add if missing)

Testing performed by

• [ ] Alexander
• [x] Jakob
• [ ] Paul
• [ ] Ryan
• [ ] Viktor