CHiCP is a Django app to visualise HiC interactions (www.chicp.org).
Pre-Installation Requirements Cairo - http://cairographics.org
Installation
pip install -e git://github.com/D-I-L/django-chicp.git#egg=chicp
pip install --exists-action w -r $PYENV_HOME/src/chicp/chicp/requirements.txt
sed -i 's|from transform import|from svgutils.transform import|' $PYENV_HOME/src/svgutils/src/svgutils/templates.py
Add "chicpea" (and analytical for google analytics) to your INSTALLED_APPS setting like this::
INSTALLED_APPS = (
...
'chicp',
)
Include the chicp URLconf in your project urls.py like this::
url(r'^chicp/', include('chicp.urls', namespace="chicp")),
Create a settings_secret.py in your django project and include it from settings.py. Add details for ELASTIC search functionality like this::
# elastic search engine
ELASTIC = {
'default': {
'ELASTIC_URL': 'http://elastic:9200/',
}
}
Setup elastic indexes for all your data in chicpea_settings.py