DeepRank iScore issues - Githubissues

DeepRank / iScore

iScore: an MPI supported software for ranking protein-protein docking models based on a random walk graph kernel and support vector machines

Apache License 2.0

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issues

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openmpi or mpich

#35 zjq101 opened 2 years ago
0
About the outputs

#34 thuxugang opened 2 years ago
2
UnpicklingError: could not find MARK

#33 NickEdmunds opened 2 years ago
1
CITATION.cff fix and automatic validation of your citation metadata

#32 abelsiqueira closed 2 years ago
0
Upgrade to GitHub-native Dependabot

#31 dependabot-preview[bot] closed 2 years ago
1
Updated pretrained model

#30 CunliangGeng closed 2 years ago
0
fail to repeat 684 dataset result

#29 jiyanbio closed 2 years ago
2
Move from travis to github actions

#28 CunliangGeng closed 3 years ago
1
Dependabot couldn't authenticate with https://pypi.python.org/simple/

#27 dependabot-preview[bot] closed 4 years ago
0
h5x support does not work on windows

#26 NicoRenaud opened 4 years ago
0
Can we make pssm mapping to pdb as default in iScore

#25 LilySnow opened 4 years ago
0
To update docs for code v0.3.4

#24 CunliangGeng opened 4 years ago
0
add badges

#23 CunliangGeng closed 4 years ago
1
Updates after CAPRI T161

#22 CunliangGeng closed 4 years ago
1
a bug with "mpiexec -n ${NPROC} iScore.predict"

#21 LilySnow closed 4 years ago
3
Use PSSMGen or not?

#20 CunliangGeng closed 4 years ago
1
we need specify in the doc or somewhere: the lower iscore the better

#19 LilySnow closed 4 years ago
1
need pssm mapping code to be more flexible

#18 LilySnow closed 4 years ago
6
fix bug to remove molecule without enough features

#17 CunliangGeng closed 4 years ago
1
error when some pdb files cannot have graph generated

#16 LilySnow closed 4 years ago
3
need the PSSM class to allow input sequence

#15 LilySnow closed 4 years ago
1
need proper error messages when pssm does not match pdb

#14 LilySnow closed 4 years ago
2
the pssm class hard-coded the file structure

#13 LilySnow closed 4 years ago
1
provide training_set.tar.gz

#12 LilySnow closed 4 years ago
1
update pdb2sql related code

#11 CunliangGeng closed 5 years ago
1
Add files via upload

#10 dragon0113 opened 5 years ago
0
issues of iscore doc

#9 LilySnow closed 4 years ago
1
how to uninstall iscore

#8 LilySnow closed 5 years ago
5
Multiple interface

#7 NicoRenaud closed 5 years ago
0
add citation

#6 NicoRenaud closed 5 years ago
0
install blast and its db in setup.py

#5 LilySnow opened 5 years ago
0
the differences between python iscore and our original matlab code

#4 LilySnow opened 5 years ago
0
let iscore to report problematics pdb files when they do not match the pssm file

#3 LilySnow opened 5 years ago
0
iScore normalization needs to be checked

#2 LilySnow opened 5 years ago
0
Could we make sure that GraphRank score is the lower the better

#1 LilySnow opened 5 years ago
0