DiODeProject MuMoT issues

DiODeProject / MuMoT

Multiscale Modelling Tool - mathematical modelling without the maths

https://mumot.readthedocs.io/

GNU General Public License v3.0

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issues

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Corrected small error in the Demo notebook Variance suppression.

#416 joefresna closed 2 years ago
0
Updated the demo notebook Variance Suppression with new analysis of t…

#415 joefresna closed 2 years ago
0
Controllers broken on MyBinder

#414 jarmarshall closed 2 years ago
1
Explicitly use JupyterHub instead of JupyterLab on MyBinder

#413 jarmarshall closed 2 years ago
1
Add CFF file to make it easier for others to cite MuMoT

#412 willfurnass opened 3 years ago
1
bifurcation() causes TypeError: cannot determine truth value of Relational

#411 joefresna closed 3 years ago
2
Modified for each visualisation of the MuMoTStochasticViews the aspec…

#410 joefresna opened 4 years ago
0
Changing visualisation type of MuMoTstochasticSimulationViews through GUI causes plot deformations (squeezing)

#409 joefresna opened 4 years ago
0
Prepare for release 1.2.2 (to fix DOI issue with 1.2.1)

#408 willfurnass closed 4 years ago
0
Intermittently hitting cell execution timeout of 120 seconds

#407 willfurnass opened 4 years ago
2
Prepare release v1.2.1

#406 willfurnass closed 4 years ago
0
Prepare for v1.2.0 release

#405 willfurnass closed 4 years ago
2
More CI/CD workflow refinements

#404 willfurnass closed 4 years ago
0
Refine gh-actions workflow further

#403 willfurnass closed 4 years ago
0
Refine gh-actions workflow

#402 willfurnass closed 4 years ago
1
CI/CD: add GitHub Actions workflow and remove Travis workflow

#401 willfurnass closed 4 years ago
0
README: add license badge

#400 willfurnass closed 4 years ago
0
Unpin coverage now new nbval released; tidy up __init__.py imports

#399 willfurnass closed 4 years ago
0
Unpin versions of ipykernel, notebook, pyzmq and tornado dependencies; add FAQ

#398 willfurnass closed 4 years ago
3
Erroneous line breaks before some (not all) in-line LaTeX in Markdown cells (Safari only)

#397 willfurnass closed 4 years ago
6
Fixed #395. Now realtimePlot (aka runtimePlot) is also available for …

#396 joefresna closed 4 years ago
0
runtime plot update for multiagent within multicontrollers disables runtime update

#395 jarmarshall closed 4 years ago
0
Switch to using setuptools_scm to embed version info in distributions

#394 willfurnass closed 4 years ago
2
Only define versions in one place (using setuptools-scm)

#393 willfurnass closed 4 years ago
1
Attempt to close #391

#392 jarmarshall closed 4 years ago
0
TkAgg error on MyBinder

#391 jarmarshall closed 4 years ago
0
Added possibility to use the graphical keywords (`xlab, ylab, fontsiz…

#390 joefresna closed 4 years ago
3
MuMoTstochasticSimulationView should support the graphical keywords as other views do

#389 joefresna closed 4 years ago
0
Unit tests: remove useless tests and tidy up the (only) two useful ones

#388 willfurnass closed 4 years ago
0
Use of bare 'except:' is bad

#387 willfurnass opened 4 years ago
1
ANTLR runtime and generated code versions disagree: 4.8!=4.7.1

#386 willfurnass closed 4 years ago
2
Multicontroller do not accept some of the plotting parameters that normal controllers support

#385 joefresna opened 4 years ago
0
Do not suppress tracebacks when running 'test' notebooks via nbval

#384 willfurnass opened 4 years ago
3
Configure logging via 'logging' module

#383 willfurnass opened 4 years ago
0
views module: make variables lowercase (convention)

#382 willfurnass closed 4 years ago
2
Do not mutate keys when iterate over dicts (plus py3.8 support)

#381 willfurnass closed 4 years ago
3
Pin 'sympy', 'coverage' and 'antlr4-python3-runtime' dependencies

#380 willfurnass closed 4 years ago
0
Incompat with Python 3.8: changing dictionary keys during iteration now results in a RuntimeError

#379 willfurnass closed 4 years ago
0
Upgrade nbval when new version released

#378 willfurnass closed 4 years ago
1
model2.showODEs(method='vanKampen') -> IndexError: list index out of range

#377 willfurnass opened 4 years ago
7
Enable py38 support in tox and setup.py

#376 willfurnass closed 4 years ago
1
Test new release of pydstool

#375 willfurnass closed 4 years ago
1
Automatic build and deploy process for releases not working

#374 willfurnass closed 4 years ago
1
Prepare release 1.1.2

#373 willfurnass closed 4 years ago
2
Updated demo notebook, about, and getting started

#372 jarmarshall closed 4 years ago
6
Revise release process inc. docs

#371 willfurnass closed 4 years ago
4
Configure ReadTheDocs so serves the latest tagged release by default...

#370 willfurnass closed 4 years ago
2
Prepare for v1.1.1 release (re-add ipywidgets to setup.py as removed by mistake)

#369 willfurnass closed 4 years ago
1
ipywidgets erroneously removed from list of deps (was: RTD builds are failing with v1.1.0)

#368 willfurnass closed 4 years ago
2
Switch to using matplotlib's object-oriented API

#367 willfurnass opened 4 years ago
1