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DiamondLightSource
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PySIMRecon
Easy to use wrapper for pyCUDAsirecon, allowing the use of DV files without PRIISM
GNU General Public License v3.0
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Use single reconstruction function from CLI as appropriate
#90
thomasmfish
closed
1 week ago
0
Add single reconstruction option
#89
thomasmfish
closed
3 weeks ago
0
Add processing directory argument
#88
thomasmfish
closed
3 weeks ago
1
Make cropping centre an argument
#87
thomasmfish
closed
1 month ago
2
No way to specify centre of image when cropping
#86
thomasmfish
closed
1 month ago
0
Fix pyright problems
#85
thomasmfish
closed
1 month ago
0
Add input and output data file paths to log header
#84
thomasmfish
closed
1 month ago
0
Enable saving reconstruction outputs as TIFF
#83
thomasmfish
closed
1 month ago
0
Improve image channel typing
#82
thomasmfish
closed
1 month ago
0
Add newline after log header
#81
thomasmfish
closed
1 month ago
0
fix typo: `_prepate_OTF_file` changed to `_prepare_OTF_file`
#80
thomasmfish
closed
1 month ago
0
Always try to create combined log file if reconstruction is attempted
#79
thomasmfish
closed
1 month ago
0
Improve naming of proc files
#78
thomasmfish
closed
1 month ago
1
Improve user messages
#77
thomasmfish
closed
1 month ago
0
Improve messaging to user
#76
thomasmfish
closed
1 month ago
0
`redirect_output_to`: `flush()`, `fsync()`, and `close` before resetting stdout and stderr
#75
thomasmfish
closed
3 weeks ago
0
remove non-Python dependency of cudasirecon from pyproject.toml
#74
thomasmfish
closed
1 month ago
0
`write_dv`: use `if array.size == 0` not `if not array` to check for …
#73
thomasmfish
closed
1 month ago
0
Ensure README is updated after generating new help docs
#72
thomasmfish
closed
1 month ago
1
Improve parser help
#71
thomasmfish
closed
1 month ago
0
Move exceptions.py into the package directory
#70
thomasmfish
closed
1 month ago
0
Add `--allow-missing-channels` argument to `sim-recon`
#69
thomasmfish
closed
1 month ago
0
Do not create blank DV files
#68
thomasmfish
closed
1 month ago
0
Improve log files
#67
thomasmfish
closed
1 month ago
0
`ChannelConfig`: check if OTF is a file
#66
thomasmfish
closed
1 month ago
0
Allow missing headers in per channel configs
#65
thomasmfish
closed
1 month ago
0
Output log files are truncated.
#64
iandobbie
opened
2 months ago
11
Multi-colour setup: some comments
#63
iandobbie
closed
1 month ago
1
handle DV OTFs
#62
thomasmfish
closed
1 month ago
1
Fit summary table.
#61
iandobbie
opened
2 months ago
2
sim-recon doesn't accept DV OTFs
#60
thomasmfish
closed
1 month ago
1
Explain configs in more detail
#59
thomasmfish
closed
1 month ago
0
Not clear how to do channel specific settings.
#58
iandobbie
closed
1 month ago
3
Improve exception handling
#57
thomasmfish
closed
1 month ago
0
Specify use of conda-forge channel
#56
thomasmfish
closed
2 months ago
0
Require cudasirecon>=1.2.0
#55
thomasmfish
closed
1 month ago
0
Improve setting handling
#54
thomasmfish
closed
1 month ago
0
New error is trying to reconstruct data
#53
iandobbie
closed
2 months ago
10
Generate docs only on changes to 'main' branch
#52
thomasmfish
closed
1 month ago
1
Generate docs on main branch only
#51
thomasmfish
closed
2 months ago
0
Generate docs on main branch only
#50
thomasmfish
closed
2 months ago
0
Generate docs on main branch only
#49
thomasmfish
closed
2 months ago
0
Make optional tqdm dependency clearer
#48
thomasmfish
closed
1 month ago
0
Add `depends_on` option for override settings
#47
thomasmfish
closed
1 month ago
0
Fix override settings
#46
thomasmfish
closed
2 months ago
0
Add note to install tqdm package
#45
iandobbie
closed
1 month ago
2
Changed otf view display amplitude and phase and not real and imaginary
#44
iandobbie
closed
2 months ago
1
OTF plotting is wrong
#43
thomasmfish
closed
2 months ago
1
Adding all defaults is confusing when they are only relevant if another argument is called
#42
thomasmfish
closed
1 month ago
0
Some settings are not being handled correctly from config
#41
thomasmfish
closed
1 month ago
0
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