Name of the column from blast results with TAIR10 and Uniprot

[mmtohm]

Hi, I have a question @wkpalan I want to know about name of the column of this file (GOMAP-piperrun3/tmp/seq-sim/tair/piperrun3-vs-At.TAIR10.bl.out)

This file shows only the BLAST results. But I want to know more about the column names.

TRINITY_DN1051_c0_g2_i3.p1 AT1G13690 278 176 246 177 12 79 0.99 30.0 66 73 28.767 21 7 TRINITY_DN1051_c0_g2_i3.p1 AT3G52660 278 167 241 471 83 153 0.99 30.4 67 75 29.333 22 4 TRINITY_DN1051_c0_g2_i3.p1 AT4G18120 278 178 239 730 223 279 1.1 30.4 67 62 30.645 19 5 TRINITY_DN1051_c0_g2_i3.p1 AT4G27290 278 115 145 783 455 485 1.2 30.4 67 31 41.935 13 0 TRINITY_DN1051_c0_g2_i3.p1 AT1G53720 278 167 249 506 235 312 1.5 30.0 66 83 25.301 21 5 TRINITY_DN1051_c0_g2_i3.p1 AT2G42890 278 176 255 843 197 268 1.8 30.0 66 80 25.000 20 8

[mmtohm]

@wkpalan

[mmtohm]

@wkpalan

[mmtohm]

@wkpalan

[wkpalan]

@mmtohm,

The blast columns in the output file is listed below.

qseqid sseqid qlen qstart qend slen sstart send evalue bitscore score length pident nident gaps