Introduction

Current Version: v1.4.0

What is GOMAP-Singularity?

GOMAP-Singularity is the containerized version of the Gene Ontology Meta Annotator for Plants (GOMAP) pipeline. GOMAP is a high-throughput pipeline to annotate GO terms to plant protein sequences. The pipeline uses three different approaches to annotate GO terms to plant protein sequences, and compile the annotations together to generate an aggregated dataset. GOMAP uses Python code to run the component tools to generate the GO annotations, and R code to clean and aggregate the GO annotations from the component tools.

How do I use GOMAP-Singularity?

Please check bioinformapping.com/gomap for detailed documentation on how to use the container.