Closed Xinfeng-Yao closed 10 months ago
row_split_order
and col_split_order
should be a list, the values should be the values of [row/col]_split.
for example:
plt.figure(figsize=(4, 8))
cm = ClusterMapPlotter(data=data1,
top_annotation=col_ha,left_annotation=row_ha,
col_cluster=True,row_cluster=True,
col_split=df_cols1.loc[:,['CellType']],
row_split=df_rows1.loc[:,['CellType']],
row_split_order=df_rows1.CellType.unique().tolist(),
col_split_order=df_rows1.CellType.unique().tolist(),
col_split_gap=0.5,row_split_gap=0.5,
label='AvgBeta',row_dendrogram=False,
show_rownames=False,show_colnames=False,
verbose=0,legend_gap=5,
cmap='viridis',rasterized=True)
Here, row_split_order is a list, and the value is the unique of df_rows1.CellType.
Hello! After using the row_split parameter to group the row items, I want to use the row_split_order parameter to set the group order, but it does not work. What I should input for the row_split_order parameter? Bool, group names list or row item index? Thanks!