issues
search
DistributedScience
/
Distributed-CellProfiler
Run encapsulated docker containers with CellProfiler in the Amazon Web Services infrastructure.
https://distributedscience.github.io/Distributed-CellProfiler/
Other
39
stars
25
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
Enable automated testing using Travis CI
#82
cclauss
closed
5 years ago
1
print() is a function in Python 3
#81
cclauss
closed
6 years ago
1
Update to fabric 2.0
#80
bethac07
closed
4 years ago
1
Hack to fix breaking changes in fabric 2.0
#79
shntnu
closed
6 years ago
1
DCP fails when metadata output structure doesn't match
#78
bethac07
closed
6 years ago
1
DCP fails when output_structure doesn't match
#77
bethac07
closed
6 years ago
0
Update to Cellprofiler official dockers
#76
bethac07
closed
5 years ago
0
Make a public data set, pipeline, CSV, job file, etc
#75
bethac07
closed
1 year ago
2
Figure how to prevent tmpdir issues with Docker
#74
bethac07
closed
4 years ago
0
Update amis
#73
bethac07
closed
6 years ago
0
Reorder steps of startCluster
#72
bethac07
closed
6 years ago
0
Update cp-worker.py
#71
bethac07
closed
6 years ago
0
Reload the monitor info before shutting down
#70
bethac07
closed
6 years ago
0
Report errors and return if spot fleet config is bad
#69
bethac07
closed
6 years ago
0
Move logging to after CHECK_IF_DONE
#68
bethac07
closed
6 years ago
0
Log groups stream to the wrong name if the worker has already tried a job and found it already processed
#67
bethac07
closed
6 years ago
0
run.py getting hung up on checking if number of requested spot instances are available
#66
bethac07
closed
6 years ago
0
Cluster deletion not working.
#65
bethac07
closed
4 years ago
1
Don't use output_structure(d) names for log names
#64
bethac07
closed
4 years ago
1
Fix while loop in cpworker move
#63
bethac07
closed
6 years ago
0
Recheck values in monitor before final shutdown procedures.
#62
bethac07
closed
6 years ago
0
Tell user if spot fleet config has an error
#61
bethac07
closed
6 years ago
1
Update version of ECS AMI version used
#60
bethac07
closed
6 years ago
0
Add flexibility to metadata input, structure of output
#59
bethac07
closed
7 years ago
0
Add 'logging' back to instance-monitor
#58
bethac07
closed
7 years ago
0
Revert "Allow configuration of docker base size"
#57
bethac07
closed
7 years ago
0
Allow configuration of docker base size
#56
bethac07
closed
7 years ago
0
Fix per-instance logging
#55
bethac07
closed
7 years ago
1
Simplify time/date coding with Arrow
#54
bethac07
closed
4 years ago
0
Create an AMI for DCP using Packer
#53
shntnu
closed
4 years ago
0
Structure the groups variable to be compatible with cellprofiler --print-groups
#52
shntnu
closed
7 years ago
3
Allow structuring of metadata in config file
#51
bethac07
closed
7 years ago
0
Create and destroy ECS clusters on demand
#50
bethac07
closed
7 years ago
0
Update run.py
#49
bethac07
closed
7 years ago
0
Wait after queue creation
#48
bethac07
closed
7 years ago
0
Fab setup aborts the first time you run it
#47
bethac07
closed
7 years ago
1
Remove duplicate logs
#46
bethac07
closed
7 years ago
0
Update license to match other lab projects
#45
AnneCarpenter
closed
7 years ago
1
Update home page of wiki to be not redundant with sub-pages
#44
AnneCarpenter
closed
7 years ago
2
Add creation of ECS cluster to fabfile
#43
bethac07
closed
7 years ago
1
Get away from S3FS and just move files from S3 as needed
#42
bethac07
closed
3 years ago
1
Simplify per-instance logs
#41
bethac07
closed
7 years ago
2
Remove queue, task definition, service at end
#40
bethac07
closed
8 years ago
0
Add per-instance logging, fix EBS volumes
#39
bethac07
closed
8 years ago
0
Use boothook to change docker machine size
#38
bethac07
closed
7 years ago
1
Remove resources on job termination
#37
bethac07
closed
8 years ago
1
Figure out why log exports sometimes fail
#36
bethac07
closed
4 years ago
1
Debug specification of multiple subnets
#35
bethac07
closed
8 years ago
1
Add specification of cluster
#34
bethac07
closed
8 years ago
0
Tag instances as they are spawned
#33
bethac07
closed
8 years ago
0
Previous
Next