EPIC - KG MVP

[dosumis]

• [x] #1
• [x] #7
• [x] #8
• [x] #9
• [ ] #10
• [x] #6
  • load uberon composite metazoan - has all the cell and anatomy ontologies you need, safely merged.
  • Load a slice of EFO with the terms you need - be conservative with the terms you take.
  • Review other ontologies needed.
• [x] Pandasaurus_cxg - extend to support all metadata loading & support dataset representation and metadata. https://github.com/INCATools/pandasaurus_cxg/issues/64
• [ ] #11
• [x] #12
  • runs conversion all scxa files to cxg h5ad
  • runs Pandasaurus on all files to generate rdf to load into OBASK
  • runs robot template pipeline to glue content together.