Closed dosumis closed 1 month ago
Set this up on a new repo - seeded using the templating mechanism in OBASK.
https://github.com/EBISPOT/scxa_kg
composite metazoan from Uberon
https://github.com/EBISPOT/scxa_kg/blob/main/config/collectdata/vfb_fullontologies.txt
Slice of EFO needed for assays
Following the curation documentation (image below), only terms under single cell library construction are used, I created an EFO slice with everything under this class.
https://github.com/EBISPOT/scxa_2_cxg/blob/main/efo_slice.owl
And added to the OBASK configuration:
https://github.com/EBISPOT/scxa_kg/blob/main/config/collectdata/vfb_fullontologies.txt
After closing the issue https://github.com/EBISPOT/scxa_kg/issues/1, here can be closed.
OBASK instance is available to run locally in the repository https://github.com/EBISPOT/scxa_kg