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EcoJulia
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Phylo.jl
Simple phylogenetic trees in Julia to work with Diversity.jl - https://github.com/EcoJulia/Diversity.jl
BSD 2-Clause "Simplified" License
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droptips! when tree size is 2
#99
richardreeve
opened
1 month ago
0
Metadata
#98
richardreeve
closed
1 month ago
1
CompatHelper: bump compat for RCall in [weakdeps] to 0.14, (keep existing compat)
#97
github-actions[bot]
closed
1 month ago
0
Minor fixes
#96
richardreeve
closed
4 months ago
0
problem with outputnode function
#95
HughMurrell
closed
4 months ago
1
Adding functionality
#93
richardreeve
opened
8 months ago
1
Standardising formatting
#92
richardreeve
closed
8 months ago
1
Node renaming
#91
richardreeve
closed
8 months ago
1
Extensions
#90
richardreeve
closed
8 months ago
1
Vectors can be AbstractVectors
#89
richardreeve
closed
8 months ago
0
Allow export of trees
#88
richardreeve
closed
8 months ago
3
Add fully recursive types, speed up parser, improve testing
#87
richardreeve
closed
9 months ago
0
1.9 fixes
#86
richardreeve
closed
9 months ago
0
Add license scan report and status
#85
fossabot
closed
10 months ago
1
Tree saving available?
#84
KYQiu21
closed
8 months ago
14
How to cite Phylo.jl?
#83
simone66b
closed
5 months ago
1
Fix unused types warnings
#82
cossio
closed
1 year ago
3
Warning about unused type variables during precompilation
#81
3f6a
closed
1 year ago
0
Bug fixes
#80
richardreeve
closed
1 year ago
2
add inference
#79
ejd99
opened
1 year ago
8
Support extended Newick?
#78
cossio
closed
8 months ago
4
Migrate from LightGraphs to Graphs
#77
cossio
closed
1 year ago
1
How to create RootedTree objects from their components?
#76
RiboRings
opened
1 year ago
1
parsenexus() tree validation fails if '-' in TaxLabels
#75
isaacovercast
closed
8 months ago
4
parsenewick can parse Newick files with support values instead of node names
#74
diegozea
opened
2 years ago
8
Add depthfirst to TraversalOrder to help with plotting
#73
diegozea
opened
2 years ago
4
How to make colorbar disctrete?
#72
casasgomezuribarri
closed
2 years ago
0
Newbie help with trait modelling and tree traversal
#71
simone66b
opened
2 years ago
17
How can I rename the leaf nodes of a ::RootedTree?
#70
casasgomezuribarri
closed
8 months ago
7
Extraneous linebreaks in `show` methods
#69
jakobnissen
closed
8 months ago
3
enum for trait simulation only works in global scope
#68
mkborregaard
closed
2 years ago
3
small doc fixes
#67
mkborregaard
closed
2 years ago
1
patches rebase issues
#66
mkborregaard
closed
2 years ago
1
Refactor docs
#65
mkborregaard
closed
2 years ago
5
Add plotting docs
#64
mkborregaard
closed
2 years ago
2
fix plotting
#63
mkborregaard
closed
2 years ago
2
Is there any function available in Phylo.jl to read phylogenetic trees from xml file?
#62
efmanu
opened
3 years ago
2
Add function to save/write a tree in Newick format
#61
diegozea
closed
8 months ago
2
restore tipannotations; fix #53
#60
BenjaminDoran
closed
3 years ago
7
CompatHelper: bump compat for "Distributions" to "0.25"
#59
github-actions[bot]
closed
3 years ago
1
CompatHelper: bump compat for "Missings" to "1.0"
#58
github-actions[bot]
closed
3 years ago
1
CompatHelper: bump compat for "DataFrames" to "1.0"
#57
github-actions[bot]
closed
3 years ago
1
Fixing workflows
#56
richardreeve
closed
3 years ago
1
Typo in README.md url
#55
remi-garcia
closed
3 years ago
2
editing leaf names
#54
shaul-pollak
closed
8 months ago
6
Plot tree doesn't show the tips
#53
diegozea
closed
3 years ago
5
Move github actions and docs to dev branch
#52
richardreeve
closed
3 years ago
0
Mkb/rev sort
#51
mkborregaard
closed
3 years ago
1
Test coverage
#50
richardreeve
closed
8 months ago
1
Compat
#49
richardreeve
closed
3 years ago
1
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