issues
search
Edinburgh-Genome-Foundry
/
DnaCauldron
:alembic: Simple cloning simulator (Golden Gate etc.) for single and combinatorial assemblies
https://edinburgh-genome-foundry.github.io/DnaCauldron/
MIT License
49
stars
11
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
Palindromes in Golden Gate assembly, only want one construct
#22
stephenturner
opened
1 month ago
5
fix write_report() for zip files
#21
Zulko
closed
1 year ago
0
Unwanted case-sensitivity when indexing fragment against source record
#20
bwvogler
closed
1 year ago
2
Fix #18 : account for new "inplace" parameter in more recent biopython
#19
Zulko
closed
1 year ago
2
TypeError: StickyEndSeq.reverse_complement() got an unexpected keyword argument 'inplace'
#18
antonkulaga
closed
1 year ago
1
example with ladders
#17
antonkulaga
opened
2 years ago
1
Test fails with Biopython v1.79
#16
veghp
closed
2 years ago
1
Assembling fragments digested by different enzymes
#15
AubinF
opened
2 years ago
5
Purpose of OligoPairAnnealing class (oligo_annealing method in assembly plan)
#14
veghp
closed
1 year ago
2
Annotating features with qualifiers
#13
benweinberg89
closed
2 years ago
1
The tutorial uses parts as keyword argument for SequenceRepository but now its collections as dict of dict
#12
fbertaux
closed
2 years ago
1
pdf_reports required but not installed by pip
#11
fbertaux
closed
2 years ago
1
Check parts assembling into enzyme sites
#10
veghp
closed
2 years ago
0
Choosing enzyme in AssemblyPlan.from_spreadsheet()
#9
veghp
closed
2 years ago
0
annotations crossing overhangs lost
#8
aaroncooper
opened
3 years ago
7
Dev
#7
veghp
closed
3 years ago
0
PDF report
#6
veghp
closed
3 years ago
1
Linear assemblies?
#5
gjerman
opened
3 years ago
3
Biopython v1.78 compatibility
#4
veghp
closed
3 years ago
2
use rapidfuzz instead of fuzzywuzzy
#3
maxbachmann
closed
3 years ago
1
problem with snapgene_reader
#2
jurquiza
closed
4 years ago
3
Fix installation from PyPI sources
#1
althonos
closed
6 years ago
4