issues
search
EichlerLab
/
isoseq_pipeline
Isoform detection with paralog-specific partitioning
2
stars
0
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
increase requested time for clustering
#17
mldough
closed
7 years ago
1
unnecessary message printed in every log file
#16
mldough
closed
7 years ago
0
rsyncing unnecessary genome indexes
#15
mldough
opened
7 years ago
0
error for no attribute 'qual'
#14
mldough
closed
7 years ago
1
input of later rule not included as output of previous rule, causing error (rule merge_gff)
#13
mldough
opened
7 years ago
0
add warning about missing segdup file
#12
mldough
closed
7 years ago
0
Add a G, G.
#11
mldough
closed
7 years ago
3
remove certain files from "output" of "ice_clustering" rule
#10
mldough
closed
7 years ago
3
remove combined/all_sizes.quivered_lq.fastq.sam from Snakefile
#9
mldough
closed
7 years ago
1
more memory for rule clean_fastq
#8
mldough
closed
7 years ago
1
clean up temporary files after ice clustering completes
#7
mldough
opened
7 years ago
0
ice_clustering gets killed
#6
mldough
closed
7 years ago
1
params for rule ice_clustering
#5
mldough
closed
7 years ago
1
failure at "clean fastq" step
#4
mldough
closed
7 years ago
1
not generating unnecessary "fail" files from bam filtering
#3
mldough
closed
7 years ago
1
Unmapped and low quality flnc reads are not included in any partition
#2
bnelsj
closed
7 years ago
0
FLNC reads with low mapping quality are ignored
#1
bnelsj
opened
7 years ago
1