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GATB
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gatb-core
Core library of the Genome Analysis Toolbox with de-Bruijn graph
https://gatb.inria.fr/software/gatb-core/
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Short term fix for undefined function on ARM Mac
#45
fgindraud
opened
3 months ago
0
Support for aarch64 / M1 macs?
#44
tfenne
closed
1 year ago
1
Tutorial links for videos and pdf are not responding
#43
Louis-MG
opened
2 years ago
0
How to use Model Direct?
#42
LucasBarbosaRocha
opened
3 years ago
1
-DNONCANONICAL doesnt work on osx?
#41
rchikhi
opened
3 years ago
0
Reading BAM files
#40
mikael-s
opened
3 years ago
4
Help Wanted
#39
anuradhawick
opened
3 years ago
1
Please tag release to allow compilation of minia
#38
smoe
opened
3 years ago
1
A different parallelisation granularity in GATB
#37
leoisl
opened
3 years ago
2
Kmer size clarification
#36
mbhall88
closed
3 years ago
2
segmentation fault with the test code
#35
kemin711
closed
4 years ago
1
char* to const char* change for copy signature, also add string interface
#34
kemin711
closed
3 years ago
2
fix some compiler warnings
#33
Smattr
closed
4 years ago
1
printf messes with type of size_t
#32
smoe
closed
4 years ago
1
Correction of CMake version requirement
#31
hnikaein
closed
4 years ago
0
problem with <boost/graph/adjacency_list.hpp>
#30
MinzhuXie
closed
4 years ago
3
Change output representation of edges to Kececioglu-Myers (bcalm issue 42)
#29
amatur
closed
4 years ago
1
compilation error with new version of AppleClang
#28
clemaitre
closed
5 years ago
6
Memory reservation in dbgh5
#27
cguyomar
closed
4 years ago
4
please create new release
#26
osallou
closed
4 years ago
2
Segmentation fault when creating de Bruijn Graph
#25
Godotcoffee
closed
5 years ago
1
Could not find ZLIB
#24
dizam92
closed
5 years ago
2
missing parts of HDF5
#23
julien-nc
closed
4 years ago
3
Depth-first search on a graph
#22
mbhall88
closed
6 years ago
7
Setting install prefix
#21
ffranr
closed
6 years ago
6
getDefaultProperties() bug
#20
rizkg
opened
6 years ago
2
Question regarding queryAbundance(node) function.
#19
ddurai
opened
6 years ago
8
Changing the path where the temp files trashme_* are created
#18
leoisl
closed
6 years ago
2
compile error
#17
tiramisutes
closed
5 years ago
2
Having some troubles with File of files
#16
leoisl
closed
7 years ago
2
mphfKind is not stored in hdf5 file
#15
Piezoid
closed
7 years ago
1
close some output information
#14
yuansliu
closed
5 years ago
2
example error in mac
#13
yuansliu
closed
7 years ago
7
Python bindings ?
#12
Piezoid
opened
7 years ago
12
LoRDEC with GATB-core-1.2.xx
#11
erivals
closed
5 years ago
2
BCALM 2 wtf: repart(max_minimizer) < repart(min_minimizer)
#10
NickSto
closed
7 years ago
9
Convenience for programmers using lambda expression
#9
leoisl
closed
8 years ago
2
Gatb-core v1.2.1 does not compile on old clang
#8
clemaitre
closed
8 years ago
5
mac compilation problem tr1
#7
rizkg
closed
8 years ago
13
GATB-Core GitHub repo cannot be used in a CMake external project
#6
karel-brinda
closed
5 years ago
4
Missing parentheses in several expressions
#5
karel-brinda
closed
8 years ago
4
be clear in the doc that Graph::buildNode() may return a real node, it's not necessarily fake.
#4
rchikhi
opened
8 years ago
0
be clear in the documentation that Graph::contains() has false positives on arbitrary nodes
#3
rchikhi
opened
8 years ago
0
add time complexities of Graph query operations in the documentation
#2
rchikhi
closed
5 years ago
0
Bugfixes for kmer counting
#1
rchikhi
closed
7 years ago
1