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GangCaoLab
/
CoolBox
Jupyter notebook based genomic data visualization toolkit.
https://gangcaolab.github.io/CoolBox/index.html
GNU General Public License v3.0
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AttributeError: 'YAxis' object has no attribute '_gridOnMajor'
#51
alexlenail
closed
3 years ago
2
Allowing XAxis() to show lengths in bp in addition to kb
#50
c-guzman
closed
2 years ago
2
Changing the way a track looks
#49
c-guzman
closed
3 years ago
8
Error when trying to parse a custom fasta/bedgraph
#48
c-guzman
opened
3 years ago
3
Heatmap of hi-c became asymmetric in size
#47
Linhua-Sun
opened
3 years ago
0
Citing CoolBox
#46
eafyounian
closed
3 years ago
4
The coordinates of loops are misplaced
#45
Linhua-Sun
closed
2 years ago
5
Can coolbox create non-symmetric heatmaps?
#44
Linhua-Sun
opened
3 years ago
5
CoolBox doesn't work with for loops?
#43
gdolsten
closed
3 years ago
2
Is there a way to visualize qualitative data?
#42
gdolsten
closed
2 years ago
6
add libcurl dep
#41
Nanguage
closed
3 years ago
0
failed with juicer's .hic format files
#40
Linhua-Sun
closed
3 years ago
8
Possibility to change positional argument in `coolbox.core.track.HiCMat()` to named argument
#39
eafyounian
closed
3 years ago
2
Changing resolution for hic matrix is not working
#38
tuomovirtanen
closed
3 years ago
2
UnicodeDecodeError in Browser with parameter img_format different than svg.
#37
eafyounian
closed
3 years ago
4
auto build doc
#36
zhqu1148980644
opened
3 years ago
1
improve documentation readability
#35
eafyounian
closed
3 years ago
8
Update installation.md
#34
eafyounian
closed
3 years ago
1
hieght of BED track is too large
#33
zhqu1148980644
closed
2 years ago
1
Empty gtf plot caused by row_filter in GTF track
#32
zhqu1148980644
opened
3 years ago
0
Staircase plot style for Hist
#31
nvictus
closed
3 years ago
1
refactor code by sourcery
#30
zhqu1148980644
closed
3 years ago
0
Reset file_handle to avoid skipping the first interval for visualization
#29
wkopp
closed
3 years ago
2
docker: invalid reference format: repository name must be lowercase.
#28
mdozmorov
closed
3 years ago
3
Ignore convertion to float for some properties
#27
wkopp
closed
3 years ago
1
bed_type needed to be set earlier
#26
wkopp
closed
3 years ago
0
fix bug in joint_view mode by swap genomerange
#25
zhqu1148980644
closed
3 years ago
0
merge to master
#24
Nanguage
closed
3 years ago
0
Doc inheritance
#23
Nanguage
closed
3 years ago
2
restore requiremnts.txt
#22
zhqu1148980644
closed
3 years ago
0
Reuse plot codes of arcs, hicpeaks
#21
zhqu1148980644
closed
3 years ago
2
undesired bed plot
#20
zhqu1148980644
closed
2 years ago
2
Allow jointview with no side tracks
#19
zhqu1148980644
closed
3 years ago
6
Add cli support for joint_view
#18
zhqu1148980644
closed
3 years ago
0
Add Peakachu track as example in doc
#17
zhqu1148980644
closed
3 years ago
0
add fetch_data and gallery for JointView
#16
zhqu1148980644
closed
3 years ago
1
Expand fetching region in IS and DI track to fill the border gap.
#15
Nanguage
opened
3 years ago
0
Add window_size ranges for InsuScore, Heatmap support for Hist
#14
zhqu1148980644
closed
3 years ago
1
Multiple window size IS score visulization
#13
Nanguage
closed
3 years ago
0
JointView proposal
#12
Nanguage
closed
3 years ago
0
Refractor hist.hicfeature module
#11
zhqu1148980644
closed
3 years ago
1
HiCFeature should support input a path to a .hic/.cool file
#10
Nanguage
closed
3 years ago
1
Add document to TAD and IS track
#9
Nanguage
closed
3 years ago
1
Add insu_score and di_score track
#8
zhqu1148980644
closed
3 years ago
0
Update python-package-conda.yml
#7
zhqu1148980644
closed
3 years ago
0
feature request: plot on given axes
#6
jksr
closed
3 years ago
1
How to overlay bigwigs?
#5
Benfeitas
closed
3 years ago
1
Can't plot Frame with HicCompare
#4
azkalot1
closed
3 years ago
1
Feature request: multiprocessing
#3
iamjli
opened
5 years ago
1
Feature request: colored arcs
#2
iamjli
closed
3 years ago
6
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