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LocusZooms
Make LocusZoom-like plots with your own LD matrix.
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Additional features (in development)
#5
Closed
rikutakei
closed
4 years ago
rikutakei
commented
4 years ago
Temporary merge of the additional LZ features, including:
labelling multiple secondary SNPs (by passing it a vector of variants)
remove code to calculate offsets for label positioning (use
pos
argument instead)
allow multiple summary stats in a single plot and adjust output size accordingly
function to read PLINK clump file
allow string representation of P, and -log10P calculation for very small P
some preliminary scripts for calculating LD and generating LZ plots in parallel
Temporary merge of the additional LZ features, including:
pos
argument instead)